Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.2□□□□□ -0.78
Timp3P39876 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Timp3P39876 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Timp3P39876 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.2□□□□□ -0.78
Timp3P39876 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.2□□□□□ -0.78
Timp3P39876 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
Timp3P39876 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Timp3P39876 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
Timp3P39876 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.2□□□□□ -0.78
Timp3P39876 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.2□□□□□ -0.78
Timp3P39876 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.2□□□□□ -0.78
Timp3P39876 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.2□□□□□ -0.78
Timp3P39876 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.2□□□□□ -0.78
Timp3P39876 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.2□□□□□ -0.78
Timp3P39876 Gm30285-201ENSMUST00000214614 422 ntBASIC10.2□□□□□ -0.78
Timp3P39876 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.2□□□□□ -0.78
Timp3P39876 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.2□□□□□ -0.78
Timp3P39876 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.2□□□□□ -0.78
Timp3P39876 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.2□□□□□ -0.78
Timp3P39876 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Timp3P39876 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Timp3P39876 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.2□□□□□ -0.78
Timp3P39876 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.19□□□□□ -0.78
Timp3P39876 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.19□□□□□ -0.78
Timp3P39876 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
Timp3P39876 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.19□□□□□ -0.78
Timp3P39876 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Timp3P39876 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 Gm15808-201ENSMUST00000119046 604 ntBASIC10.19□□□□□ -0.78
Timp3P39876 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 Gm29199-201ENSMUST00000187766 775 ntBASIC10.19□□□□□ -0.78
Timp3P39876 Gm31256-201ENSMUST00000194705 506 ntBASIC10.19□□□□□ -0.78
Timp3P39876 Gm18056-201ENSMUST00000207670 568 ntBASIC10.19□□□□□ -0.78
Timp3P39876 Gm18061-201ENSMUST00000208350 562 ntBASIC10.19□□□□□ -0.78
Timp3P39876 Gm18063-201ENSMUST00000208529 568 ntBASIC10.19□□□□□ -0.78
Timp3P39876 Gm18052-201ENSMUST00000208750 559 ntBASIC10.19□□□□□ -0.78
Timp3P39876 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.19□□□□□ -0.78
Timp3P39876 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.19□□□□□ -0.78
Timp3P39876 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.19□□□□□ -0.78
Timp3P39876 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.19□□□□□ -0.78
Timp3P39876 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.19□□□□□ -0.78
Timp3P39876 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Timp3P39876 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.19□□□□□ -0.78
Timp3P39876 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Timp3P39876 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Timp3P39876 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.18□□□□□ -0.78
Timp3P39876 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms