Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh4P39038 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh4P39038 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh4P39038 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh4P39038 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh4P39038 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh4P39038 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdh4P39038 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cdh4P39038 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cdh4P39038 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cdh4P39038 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cdh4P39038 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cdh4P39038 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.9□□□□□ -0.51
Cdh4P39038 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh4P39038 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.89□□□□□ -0.51
Cdh4P39038 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.89□□□□□ -0.51
Cdh4P39038 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh4P39038 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh4P39038 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdh4P39038 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh4P39038 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh4P39038 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh4P39038 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh4P39038 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh4P39038 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdh4P39038 Gm11531-201ENSMUST00000117614 555 ntBASIC11.89□□□□□ -0.51
Cdh4P39038 Gm14999-201ENSMUST00000121039 624 ntBASIC11.89□□□□□ -0.51
Cdh4P39038 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.89□□□□□ -0.51
Cdh4P39038 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh4P39038 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.89□□□□□ -0.51
Cdh4P39038 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cdh4P39038 Gm38341-201ENSMUST00000195357 515 ntBASIC11.89□□□□□ -0.51
Cdh4P39038 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdh4P39038 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.89□□□□□ -0.51
Cdh4P39038 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdh4P39038 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdh4P39038 Gm5950-201ENSMUST00000213337 772 ntBASIC11.89□□□□□ -0.51
Cdh4P39038 Gm30285-201ENSMUST00000214614 422 ntBASIC11.89□□□□□ -0.51
Cdh4P39038 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.89□□□□□ -0.51
Cdh4P39038 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh4P39038 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh4P39038 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh4P39038 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cdh4P39038 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh4P39038 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.89□□□□□ -0.51
Cdh4P39038 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.89□□□□□ -0.51
Cdh4P39038 Paupar-201ENSMUST00000194826 3482 ntBASIC11.89□□□□□ -0.51
Cdh4P39038 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cdh4P39038 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh4P39038 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh4P39038 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh4P39038 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cdh4P39038 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh4P39038 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.88□□□□□ -0.51
Cdh4P39038 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh4P39038 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.88□□□□□ -0.51
Cdh4P39038 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.88□□□□□ -0.51
Cdh4P39038 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdh4P39038 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cdh4P39038 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh4P39038 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh4P39038 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh4P39038 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdh4P39038 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdh4P39038 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh4P39038 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh4P39038 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh4P39038 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh4P39038 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh4P39038 Gm25043-201ENSMUST00000158604 212 ntBASIC11.88□□□□□ -0.51
Cdh4P39038 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh4P39038 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.88□□□□□ -0.51
Cdh4P39038 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh4P39038 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.88□□□□□ -0.51
Cdh4P39038 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh4P39038 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh4P39038 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh4P39038 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh4P39038 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh4P39038 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh4P39038 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh4P39038 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh4P39038 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh4P39038 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh4P39038 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdh4P39038 Pck2-205ENSMUST00000226352 2784 ntBASIC11.88□□□□□ -0.51
Cdh4P39038 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdh4P39038 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cdh4P39038 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdh4P39038 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh4P39038 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Cdh4P39038 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh4P39038 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.87□□□□□ -0.51
Cdh4P39038 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh4P39038 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh4P39038 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cdh4P39038 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh4P39038 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.87□□□□□ -0.51
Cdh4P39038 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdh4P39038 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms