Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rfc1P35601 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rfc1P35601 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfc1P35601 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfc1P35601 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rfc1P35601 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfc1P35601 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.07□□□□□ -0.32
Rfc1P35601 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rfc1P35601 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfc1P35601 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfc1P35601 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Rfc1P35601 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfc1P35601 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfc1P35601 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfc1P35601 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.07□□□□□ -0.32
Rfc1P35601 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rfc1P35601 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.07□□□□□ -0.32
Rfc1P35601 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.07□□□□□ -0.32
Rfc1P35601 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Rfc1P35601 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.07□□□□□ -0.32
Rfc1P35601 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfc1P35601 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.07□□□□□ -0.32
Rfc1P35601 Gm19220-201ENSMUST00000222682 803 ntBASIC13.07□□□□□ -0.32
Rfc1P35601 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.07□□□□□ -0.32
Rfc1P35601 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfc1P35601 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfc1P35601 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfc1P35601 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.07□□□□□ -0.32
Rfc1P35601 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Rfc1P35601 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.07□□□□□ -0.32
Rfc1P35601 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rfc1P35601 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfc1P35601 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC13.07□□□□□ -0.32
Rfc1P35601 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfc1P35601 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Rfc1P35601 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfc1P35601 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.07□□□□□ -0.32
Rfc1P35601 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rfc1P35601 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Rfc1P35601 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.06□□□□□ -0.32
Rfc1P35601 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Rfc1P35601 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.06□□□□□ -0.32
Rfc1P35601 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC13.06□□□□□ -0.32
Rfc1P35601 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.06□□□□□ -0.32
Rfc1P35601 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.06□□□□□ -0.32
Rfc1P35601 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.06□□□□□ -0.32
Rfc1P35601 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.06□□□□□ -0.32
Rfc1P35601 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Rfc1P35601 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.06□□□□□ -0.32
Rfc1P35601 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Rfc1P35601 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Rfc1P35601 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Rfc1P35601 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Rfc1P35601 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.06□□□□□ -0.32
Rfc1P35601 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Rfc1P35601 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Rfc1P35601 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Rfc1P35601 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.05□□□□□ -0.32
Rfc1P35601 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rfc1P35601 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms