Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Rom1P32958 Gm6992-201ENSMUST00000217973 1607 ntBASIC9.79□□□□□ -0.84
Rom1P32958 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rom1P32958 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rom1P32958 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rom1P32958 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Rom1P32958 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rom1P32958 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rom1P32958 Gm8038-201ENSMUST00000164674 2044 ntBASIC9.79□□□□□ -0.84
Rom1P32958 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rom1P32958 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rom1P32958 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rom1P32958 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rom1P32958 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC9.79□□□□□ -0.84
Rom1P32958 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rom1P32958 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC9.79□□□□□ -0.84
Rom1P32958 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rom1P32958 Gm4034-201ENSMUST00000187674 480 ntBASIC9.79□□□□□ -0.84
Rom1P32958 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC9.79□□□□□ -0.84
Rom1P32958 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC9.79□□□□□ -0.84
Rom1P32958 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC9.79□□□□□ -0.84
Rom1P32958 Gm44772-201ENSMUST00000207623 1191 ntBASIC9.79□□□□□ -0.84
Rom1P32958 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Rom1P32958 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rom1P32958 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rom1P32958 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rom1P32958 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rom1P32958 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rom1P32958 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rom1P32958 Gm44260-201ENSMUST00000204946 2094 ntBASIC9.79□□□□□ -0.84
Rom1P32958 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Rom1P32958 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Rom1P32958 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rom1P32958 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC9.79□□□□□ -0.84
Rom1P32958 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rom1P32958 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC9.79□□□□□ -0.84
Rom1P32958 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rom1P32958 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rom1P32958 Gm40377-201ENSMUST00000204604 2015 ntBASIC9.78□□□□□ -0.84
Rom1P32958 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Rom1P32958 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC9.78□□□□□ -0.84
Rom1P32958 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Rom1P32958 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC9.78□□□□□ -0.84
Rom1P32958 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC9.78□□□□□ -0.84
Rom1P32958 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC9.78□□□□□ -0.84
Rom1P32958 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Rom1P32958 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 Gm13689-201ENSMUST00000119360 685 ntBASIC9.78□□□□□ -0.84
Rom1P32958 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC9.78□□□□□ -0.84
Rom1P32958 Rmrp-201ENSMUST00000157463 271 ntBASIC9.78□□□□□ -0.84
Rom1P32958 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC9.78□□□□□ -0.84
Rom1P32958 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.78□□□□□ -0.84
Rom1P32958 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC9.78□□□□□ -0.84
Rom1P32958 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC9.78□□□□□ -0.84
Rom1P32958 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC9.78□□□□□ -0.84
Rom1P32958 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC9.78□□□□□ -0.84
Rom1P32958 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC9.78□□□□□ -0.84
Rom1P32958 Gm19220-201ENSMUST00000222682 803 ntBASIC9.78□□□□□ -0.84
Rom1P32958 AL732506.1-201ENSMUST00000226420 281 ntBASIC9.78□□□□□ -0.84
Rom1P32958 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 Hist1h2al-201ENSMUST00000091708 339 ntBASIC9.78□□□□□ -0.84
Rom1P32958 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC9.78□□□□□ -0.84
Rom1P32958 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Rom1P32958 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC9.78□□□□□ -0.84
Rom1P32958 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC9.78□□□□□ -0.84
Rom1P32958 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Rom1P32958 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Rom1P32958 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC9.77□□□□□ -0.84
Rom1P32958 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Rom1P32958 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Rom1P32958 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Rom1P32958 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC9.77□□□□□ -0.84
Rom1P32958 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Rom1P32958 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Rom1P32958 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC9.77□□□□□ -0.84
Rom1P32958 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Rom1P32958 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms