Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc5P32043 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Hoxc5P32043 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Hoxc5P32043 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Hoxc5P32043 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc5P32043 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc5P32043 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Hoxc5P32043 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc5P32043 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.51□□□□□ -0.57
Hoxc5P32043 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Hoxc5P32043 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.51□□□□□ -0.57
Hoxc5P32043 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Hoxc5P32043 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.5□□□□□ -0.57
Hoxc5P32043 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Hoxc5P32043 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Hoxc5P32043 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Hoxc5P32043 Gm12390-201ENSMUST00000117897 397 ntBASIC11.5□□□□□ -0.57
Hoxc5P32043 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.5□□□□□ -0.57
Hoxc5P32043 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.5□□□□□ -0.57
Hoxc5P32043 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Hoxc5P32043 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Gm9630-201ENSMUST00000178304 885 ntBASIC11.5□□□□□ -0.57
Hoxc5P32043 Gm8602-201ENSMUST00000184045 607 ntBASIC11.5□□□□□ -0.57
Hoxc5P32043 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.5□□□□□ -0.57
Hoxc5P32043 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.5□□□□□ -0.57
Hoxc5P32043 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Hoxc5P32043 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Hoxc5P32043 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Hoxc5P32043 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.5□□□□□ -0.57
Hoxc5P32043 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Hoxc5P32043 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxc5P32043 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxc5P32043 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxc5P32043 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.49□□□□□ -0.57
Hoxc5P32043 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxc5P32043 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Hoxc5P32043 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxc5P32043 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxc5P32043 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxc5P32043 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.49□□□□□ -0.57
Hoxc5P32043 Gm15703-201ENSMUST00000120250 880 ntBASIC11.49□□□□□ -0.57
Hoxc5P32043 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.49□□□□□ -0.57
Hoxc5P32043 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.49□□□□□ -0.57
Hoxc5P32043 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxc5P32043 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.49□□□□□ -0.57
Hoxc5P32043 Gm43818-201ENSMUST00000200605 466 ntBASIC11.49□□□□□ -0.57
Hoxc5P32043 Gm40466-201ENSMUST00000212174 422 ntBASIC11.49□□□□□ -0.57
Hoxc5P32043 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.49□□□□□ -0.57
Hoxc5P32043 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxc5P32043 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxc5P32043 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxc5P32043 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.49□□□□□ -0.57
Hoxc5P32043 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxc5P32043 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxc5P32043 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxc5P32043 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxc5P32043 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxc5P32043 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxc5P32043 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxc5P32043 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.49□□□□□ -0.57
Hoxc5P32043 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxc5P32043 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Hoxc5P32043 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.49□□□□□ -0.57
Hoxc5P32043 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxc5P32043 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.49□□□□□ -0.57
Hoxc5P32043 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxc5P32043 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms