Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Slc6a1P31648 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Slc6a1P31648 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.69□□□□□ -0.7
Slc6a1P31648 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Slc6a1P31648 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Slc6a1P31648 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.68□□□□□ -0.7
Slc6a1P31648 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Slc6a1P31648 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Slc6a1P31648 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.68□□□□□ -0.7
Slc6a1P31648 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.68□□□□□ -0.7
Slc6a1P31648 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.68□□□□□ -0.7
Slc6a1P31648 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Gm15240-201ENSMUST00000118156 720 ntBASIC10.68□□□□□ -0.7
Slc6a1P31648 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.68□□□□□ -0.7
Slc6a1P31648 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.68□□□□□ -0.7
Slc6a1P31648 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Slc6a1P31648 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC10.68□□□□□ -0.7
Slc6a1P31648 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.68□□□□□ -0.7
Slc6a1P31648 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.68□□□□□ -0.7
Slc6a1P31648 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.68□□□□□ -0.7
Slc6a1P31648 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.68□□□□□ -0.7
Slc6a1P31648 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.68□□□□□ -0.7
Slc6a1P31648 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Slc6a1P31648 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Slc6a1P31648 Gm42690-201ENSMUST00000197921 1836 ntBASIC10.68□□□□□ -0.7
Slc6a1P31648 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Slc6a1P31648 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.67□□□□□ -0.7
Slc6a1P31648 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.67□□□□□ -0.7
Slc6a1P31648 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC10.67□□□□□ -0.7
Slc6a1P31648 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.67□□□□□ -0.7
Slc6a1P31648 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Slc6a1P31648 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Slc6a1P31648 Gm18307-201ENSMUST00000206864 949 ntBASIC10.67□□□□□ -0.7
Slc6a1P31648 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms