Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.19□□□□□ -0.14
Vcam1P29533 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vcam1P29533 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vcam1P29533 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Vcam1P29533 Gm14724-201ENSMUST00000118400 537 ntBASIC14.19□□□□□ -0.14
Vcam1P29533 Gm8199-201ENSMUST00000121323 823 ntBASIC14.19□□□□□ -0.14
Vcam1P29533 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.19□□□□□ -0.14
Vcam1P29533 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Vcam1P29533 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.19□□□□□ -0.14
Vcam1P29533 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.19□□□□□ -0.14
Vcam1P29533 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.19□□□□□ -0.14
Vcam1P29533 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vcam1P29533 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vcam1P29533 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.19□□□□□ -0.14
Vcam1P29533 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Vcam1P29533 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vcam1P29533 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Vcam1P29533 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Vcam1P29533 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vcam1P29533 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vcam1P29533 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vcam1P29533 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.19□□□□□ -0.14
Vcam1P29533 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vcam1P29533 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vcam1P29533 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vcam1P29533 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vcam1P29533 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Vcam1P29533 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vcam1P29533 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vcam1P29533 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Vcam1P29533 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vcam1P29533 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.18□□□□□ -0.14
Vcam1P29533 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Vcam1P29533 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vcam1P29533 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vcam1P29533 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vcam1P29533 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vcam1P29533 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vcam1P29533 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.18□□□□□ -0.14
Vcam1P29533 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vcam1P29533 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Vcam1P29533 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vcam1P29533 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vcam1P29533 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vcam1P29533 Gm5419-201ENSMUST00000119301 527 ntBASIC14.18□□□□□ -0.14
Vcam1P29533 Gm15432-201ENSMUST00000121106 195 ntBASIC14.18□□□□□ -0.14
Vcam1P29533 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vcam1P29533 Gm23085-201ENSMUST00000157849 293 ntBASIC14.18□□□□□ -0.14
Vcam1P29533 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vcam1P29533 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vcam1P29533 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vcam1P29533 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vcam1P29533 Gm7467-201ENSMUST00000185173 652 ntBASIC14.18□□□□□ -0.14
Vcam1P29533 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC14.18□□□□□ -0.14
Vcam1P29533 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.18□□□□□ -0.14
Vcam1P29533 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC14.18□□□□□ -0.14
Vcam1P29533 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vcam1P29533 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vcam1P29533 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.18□□□□□ -0.14
Vcam1P29533 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Vcam1P29533 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vcam1P29533 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vcam1P29533 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vcam1P29533 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Vcam1P29533 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vcam1P29533 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vcam1P29533 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.17□□□□□ -0.14
Vcam1P29533 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Vcam1P29533 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vcam1P29533 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vcam1P29533 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vcam1P29533 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vcam1P29533 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vcam1P29533 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Vcam1P29533 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14.17□□□□□ -0.14
Vcam1P29533 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
Vcam1P29533 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.17□□□□□ -0.14
Vcam1P29533 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vcam1P29533 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC14.17□□□□□ -0.14
Vcam1P29533 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.17□□□□□ -0.14
Vcam1P29533 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Vcam1P29533 Gm8100-201ENSMUST00000182906 988 ntBASIC14.17□□□□□ -0.14
Vcam1P29533 Mir6546-201ENSMUST00000184460 62 ntBASIC14.17□□□□□ -0.14
Vcam1P29533 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vcam1P29533 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vcam1P29533 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vcam1P29533 Gm18893-201ENSMUST00000198416 943 ntBASIC14.17□□□□□ -0.14
Vcam1P29533 Gm8956-201ENSMUST00000203939 825 ntBASIC14.17□□□□□ -0.14
Vcam1P29533 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.17□□□□□ -0.14
Vcam1P29533 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vcam1P29533 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC14.17□□□□□ -0.14
Vcam1P29533 Gm9797-202ENSMUST00000218003 294 ntBASIC14.17□□□□□ -0.14
Vcam1P29533 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14.17□□□□□ -0.14
Vcam1P29533 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vcam1P29533 Gm6781-201ENSMUST00000038304 1242 ntBASIC14.17□□□□□ -0.14
Vcam1P29533 Ginm1-202ENSMUST00000065124 300 ntBASIC14.17□□□□□ -0.14
Vcam1P29533 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vcam1P29533 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Vcam1P29533 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Vcam1P29533 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms