Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
RxrbP28704 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RxrbP28704 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RxrbP28704 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
RxrbP28704 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RxrbP28704 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RxrbP28704 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.44□□□□□ -0.42
RxrbP28704 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RxrbP28704 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.44□□□□□ -0.42
RxrbP28704 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RxrbP28704 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.43□□□□□ -0.42
RxrbP28704 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RxrbP28704 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RxrbP28704 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RxrbP28704 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.43□□□□□ -0.42
RxrbP28704 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.43□□□□□ -0.42
RxrbP28704 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
RxrbP28704 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.43□□□□□ -0.42
RxrbP28704 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
RxrbP28704 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.43□□□□□ -0.42
RxrbP28704 Gm8213-201ENSMUST00000118191 441 ntBASIC12.43□□□□□ -0.42
RxrbP28704 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Gm22121-201ENSMUST00000175148 54 ntBASIC12.43□□□□□ -0.42
RxrbP28704 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RxrbP28704 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
RxrbP28704 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
RxrbP28704 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RxrbP28704 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
RxrbP28704 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.42□□□□□ -0.42
RxrbP28704 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.42□□□□□ -0.42
RxrbP28704 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.42□□□□□ -0.42
RxrbP28704 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
RxrbP28704 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
RxrbP28704 Gm11618-201ENSMUST00000117946 267 ntBASIC12.42□□□□□ -0.42
RxrbP28704 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.42□□□□□ -0.42
RxrbP28704 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.42□□□□□ -0.42
RxrbP28704 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.42□□□□□ -0.42
RxrbP28704 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.42□□□□□ -0.42
RxrbP28704 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.42□□□□□ -0.42
RxrbP28704 Gm38671-201ENSMUST00000200573 130 ntBASIC12.42□□□□□ -0.42
RxrbP28704 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
RxrbP28704 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms