Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.89□□□□□ -0.19
Col2a1P28481 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.89□□□□□ -0.19
Col2a1P28481 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.89□□□□□ -0.19
Col2a1P28481 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col2a1P28481 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col2a1P28481 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col2a1P28481 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Col2a1P28481 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Col2a1P28481 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Col2a1P28481 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.89□□□□□ -0.19
Col2a1P28481 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col2a1P28481 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col2a1P28481 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col2a1P28481 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.89□□□□□ -0.19
Col2a1P28481 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
Col2a1P28481 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col2a1P28481 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col2a1P28481 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col2a1P28481 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC13.89□□□□□ -0.19
Col2a1P28481 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col2a1P28481 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col2a1P28481 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Col2a1P28481 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Col2a1P28481 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.88□□□□□ -0.19
Col2a1P28481 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.88□□□□□ -0.19
Col2a1P28481 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.88□□□□□ -0.19
Col2a1P28481 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.88□□□□□ -0.19
Col2a1P28481 Gm13916-201ENSMUST00000117368 628 ntBASIC13.88□□□□□ -0.19
Col2a1P28481 Gm15352-201ENSMUST00000118696 270 ntBASIC13.88□□□□□ -0.19
Col2a1P28481 Gm15131-201ENSMUST00000119124 595 ntBASIC13.88□□□□□ -0.19
Col2a1P28481 Gm7666-201ENSMUST00000146631 819 ntBASIC13.88□□□□□ -0.19
Col2a1P28481 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 Gm3508-201ENSMUST00000186012 792 ntBASIC13.88□□□□□ -0.19
Col2a1P28481 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.88□□□□□ -0.19
Col2a1P28481 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Col2a1P28481 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
Col2a1P28481 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col2a1P28481 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Col2a1P28481 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col2a1P28481 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col2a1P28481 Gm11667-201ENSMUST00000119828 486 ntBASIC13.87□□□□□ -0.19
Col2a1P28481 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC13.87□□□□□ -0.19
Col2a1P28481 Gm12407-201ENSMUST00000180219 324 ntBASIC13.87□□□□□ -0.19
Col2a1P28481 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col2a1P28481 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.87□□□□□ -0.19
Col2a1P28481 Gm27390-201ENSMUST00000184516 176 ntBASIC13.87□□□□□ -0.19
Col2a1P28481 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.87□□□□□ -0.19
Col2a1P28481 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col2a1P28481 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col2a1P28481 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.87□□□□□ -0.19
Col2a1P28481 Gm38151-201ENSMUST00000195085 289 ntBASIC13.87□□□□□ -0.19
Col2a1P28481 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.87□□□□□ -0.19
Col2a1P28481 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC13.87□□□□□ -0.19
Col2a1P28481 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col2a1P28481 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col2a1P28481 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col2a1P28481 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col2a1P28481 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Col2a1P28481 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col2a1P28481 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col2a1P28481 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col2a1P28481 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col2a1P28481 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col2a1P28481 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col2a1P28481 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col2a1P28481 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col2a1P28481 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col2a1P28481 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col2a1P28481 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col2a1P28481 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col2a1P28481 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Col2a1P28481 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col2a1P28481 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col2a1P28481 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Col2a1P28481 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms