Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.91□□□□□ -0.34
H2afxP27661 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
H2afxP27661 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H2afxP27661 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.9□□□□□ -0.34
H2afxP27661 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
H2afxP27661 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
H2afxP27661 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
H2afxP27661 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.9□□□□□ -0.34
H2afxP27661 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Gm16202-201ENSMUST00000117532 544 ntBASIC12.9□□□□□ -0.34
H2afxP27661 Gm12260-201ENSMUST00000122447 411 ntBASIC12.9□□□□□ -0.34
H2afxP27661 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
H2afxP27661 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.9□□□□□ -0.34
H2afxP27661 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
H2afxP27661 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
H2afxP27661 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
H2afxP27661 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
H2afxP27661 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.9□□□□□ -0.34
H2afxP27661 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.9□□□□□ -0.34
H2afxP27661 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.9□□□□□ -0.34
H2afxP27661 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.9□□□□□ -0.34
H2afxP27661 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.9□□□□□ -0.34
H2afxP27661 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
H2afxP27661 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.9□□□□□ -0.34
H2afxP27661 Gm24136-201ENSMUST00000083374 165 ntBASIC12.9□□□□□ -0.34
H2afxP27661 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
H2afxP27661 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
H2afxP27661 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.9□□□□□ -0.34
H2afxP27661 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afxP27661 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
H2afxP27661 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
H2afxP27661 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afxP27661 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afxP27661 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.89□□□□□ -0.35
H2afxP27661 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afxP27661 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H2afxP27661 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
H2afxP27661 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afxP27661 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afxP27661 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afxP27661 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afxP27661 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afxP27661 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H2afxP27661 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afxP27661 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afxP27661 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.89□□□□□ -0.35
H2afxP27661 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.89□□□□□ -0.35
H2afxP27661 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
H2afxP27661 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afxP27661 Gm16296-201ENSMUST00000159905 325 ntBASIC12.89□□□□□ -0.35
H2afxP27661 Gm28693-202ENSMUST00000190758 331 ntBASIC12.89□□□□□ -0.35
H2afxP27661 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
H2afxP27661 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
H2afxP27661 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.89□□□□□ -0.35
H2afxP27661 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.89□□□□□ -0.35
H2afxP27661 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.89□□□□□ -0.35
H2afxP27661 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.89□□□□□ -0.35
H2afxP27661 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.89□□□□□ -0.35
H2afxP27661 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.89□□□□□ -0.35
H2afxP27661 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
H2afxP27661 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms