Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.65□□□□□ -0.54
Clk1P22518 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Clk1P22518 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clk1P22518 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clk1P22518 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Clk1P22518 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clk1P22518 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Clk1P22518 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clk1P22518 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clk1P22518 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.65□□□□□ -0.54
Clk1P22518 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clk1P22518 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clk1P22518 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clk1P22518 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clk1P22518 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Clk1P22518 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clk1P22518 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.65□□□□□ -0.54
Clk1P22518 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.65□□□□□ -0.54
Clk1P22518 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.65□□□□□ -0.54
Clk1P22518 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clk1P22518 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.65□□□□□ -0.54
Clk1P22518 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.65□□□□□ -0.54
Clk1P22518 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.65□□□□□ -0.54
Clk1P22518 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clk1P22518 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.65□□□□□ -0.54
Clk1P22518 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clk1P22518 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clk1P22518 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clk1P22518 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clk1P22518 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Clk1P22518 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clk1P22518 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clk1P22518 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clk1P22518 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Clk1P22518 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Clk1P22518 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Clk1P22518 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.55
Clk1P22518 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.65□□□□□ -0.55
Clk1P22518 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Clk1P22518 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Clk1P22518 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Clk1P22518 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Clk1P22518 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC11.64□□□□□ -0.55
Clk1P22518 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Clk1P22518 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.64□□□□□ -0.55
Clk1P22518 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.64□□□□□ -0.55
Clk1P22518 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.64□□□□□ -0.55
Clk1P22518 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC11.64□□□□□ -0.55
Clk1P22518 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.64□□□□□ -0.55
Clk1P22518 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.64□□□□□ -0.55
Clk1P22518 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.64□□□□□ -0.55
Clk1P22518 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Clk1P22518 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.64□□□□□ -0.55
Clk1P22518 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Gm27682-201ENSMUST00000183930 110 ntBASIC11.64□□□□□ -0.55
Clk1P22518 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Gm6266-201ENSMUST00000203844 806 ntBASIC11.64□□□□□ -0.55
Clk1P22518 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.64□□□□□ -0.55
Clk1P22518 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.64□□□□□ -0.55
Clk1P22518 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.64□□□□□ -0.55
Clk1P22518 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Clk1P22518 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Mir339-201ENSMUST00000083659 96 ntBASIC11.64□□□□□ -0.55
Clk1P22518 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.64□□□□□ -0.55
Clk1P22518 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.64□□□□□ -0.55
Clk1P22518 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Clk1P22518 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Clk1P22518 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Clk1P22518 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.63□□□□□ -0.55
Clk1P22518 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Clk1P22518 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms