Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl1P10146 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC9.59□□□□□ -0.87
Ccl1P10146 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl1P10146 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl1P10146 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl1P10146 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl1P10146 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl1P10146 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl1P10146 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl1P10146 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl1P10146 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl1P10146 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl1P10146 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Ccl1P10146 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl1P10146 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl1P10146 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl1P10146 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl1P10146 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Ccl1P10146 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Ccl1P10146 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.58□□□□□ -0.88
Ccl1P10146 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Ccl1P10146 Gm5648-201ENSMUST00000122244 1587 ntBASIC9.58□□□□□ -0.88
Ccl1P10146 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Ccl1P10146 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC9.58□□□□□ -0.88
Ccl1P10146 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Ccl1P10146 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 Gm2128-201ENSMUST00000108009 2560 ntBASIC9.58□□□□□ -0.88
Ccl1P10146 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Ccl1P10146 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Ccl1P10146 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC9.58□□□□□ -0.88
Ccl1P10146 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC9.58□□□□□ -0.88
Ccl1P10146 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC9.58□□□□□ -0.88
Ccl1P10146 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC9.58□□□□□ -0.88
Ccl1P10146 Gm38294-201ENSMUST00000192831 381 ntBASIC9.58□□□□□ -0.88
Ccl1P10146 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Ccl1P10146 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Ccl1P10146 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 AC126262.1-201ENSMUST00000221802 1904 ntBASIC9.58□□□□□ -0.88
Ccl1P10146 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC9.58□□□□□ -0.88
Ccl1P10146 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Ccl1P10146 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Ccl1P10146 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccl1P10146 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccl1P10146 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ccl1P10146 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccl1P10146 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ccl1P10146 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccl1P10146 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.57□□□□□ -0.88
Ccl1P10146 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC9.57□□□□□ -0.88
Ccl1P10146 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccl1P10146 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccl1P10146 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Ccl1P10146 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Ccl1P10146 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Ccl1P10146 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.57□□□□□ -0.88
Ccl1P10146 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccl1P10146 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccl1P10146 Gm16202-201ENSMUST00000117532 544 ntBASIC9.57□□□□□ -0.88
Ccl1P10146 Gm27680-201ENSMUST00000184192 160 ntBASIC9.57□□□□□ -0.88
Ccl1P10146 Gm10576-201ENSMUST00000191927 825 ntBASIC9.57□□□□□ -0.88
Ccl1P10146 Gm37277-201ENSMUST00000194052 1111 ntBASIC9.57□□□□□ -0.88
Ccl1P10146 Gm5279-201ENSMUST00000199575 745 ntBASIC9.57□□□□□ -0.88
Ccl1P10146 Gm43172-201ENSMUST00000202139 2137 ntBASIC9.57□□□□□ -0.88
Ccl1P10146 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccl1P10146 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC9.57□□□□□ -0.88
Ccl1P10146 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC9.57□□□□□ -0.88
Ccl1P10146 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC9.57□□□□□ -0.88
Ccl1P10146 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC9.57□□□□□ -0.88
Ccl1P10146 AC139580.1-202ENSMUST00000223574 928 ntBASIC9.57□□□□□ -0.88
Ccl1P10146 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccl1P10146 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccl1P10146 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Ccl1P10146 Gm42498-201ENSMUST00000199981 1372 ntBASIC9.57□□□□□ -0.88
Ccl1P10146 AC101945.2-201ENSMUST00000227886 1377 ntBASIC9.57□□□□□ -0.88
Ccl1P10146 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Ccl1P10146 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms