Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC12.48□□□□□ -0.41
Hoxb3P09026 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb3P09026 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb3P09026 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Hoxb3P09026 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Hoxb3P09026 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb3P09026 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb3P09026 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb3P09026 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.48□□□□□ -0.41
Hoxb3P09026 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb3P09026 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb3P09026 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Hoxb3P09026 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb3P09026 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb3P09026 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Hoxb3P09026 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb3P09026 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Hoxb3P09026 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hoxb3P09026 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Hoxb3P09026 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.47□□□□□ -0.41
Hoxb3P09026 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.47□□□□□ -0.41
Hoxb3P09026 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.47□□□□□ -0.41
Hoxb3P09026 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Hoxb3P09026 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Hoxb3P09026 Gm14274-201ENSMUST00000117182 615 ntBASIC12.47□□□□□ -0.41
Hoxb3P09026 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.47□□□□□ -0.41
Hoxb3P09026 Gm13549-201ENSMUST00000118339 796 ntBASIC12.47□□□□□ -0.41
Hoxb3P09026 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.47□□□□□ -0.41
Hoxb3P09026 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 Gm23757-201ENSMUST00000158353 100 ntBASIC12.47□□□□□ -0.41
Hoxb3P09026 Gm27216-202ENSMUST00000184100 635 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 Gm28439-201ENSMUST00000187714 876 ntBASIC12.47□□□□□ -0.41
Hoxb3P09026 Trav11n-201ENSMUST00000200113 343 ntBASIC12.47□□□□□ -0.41
Hoxb3P09026 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.47□□□□□ -0.41
Hoxb3P09026 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC12.47□□□□□ -0.41
Hoxb3P09026 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Hoxb3P09026 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Hoxb3P09026 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.47□□□□□ -0.41
Hoxb3P09026 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Hoxb3P09026 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxb3P09026 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxb3P09026 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxb3P09026 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.46□□□□□ -0.41
Hoxb3P09026 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxb3P09026 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxb3P09026 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxb3P09026 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC12.46□□□□□ -0.41
Hoxb3P09026 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxb3P09026 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Hoxb3P09026 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxb3P09026 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Hoxb3P09026 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.46□□□□□ -0.41
Hoxb3P09026 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxb3P09026 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.46□□□□□ -0.41
Hoxb3P09026 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxb3P09026 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxb3P09026 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxb3P09026 Mir669o-201ENSMUST00000103898 96 ntBASIC12.46□□□□□ -0.41
Hoxb3P09026 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxb3P09026 Gm24749-201ENSMUST00000157838 343 ntBASIC12.46□□□□□ -0.41
Hoxb3P09026 Gm16337-201ENSMUST00000160368 917 ntTSL 3 BASIC12.46□□□□□ -0.41
Hoxb3P09026 Gm5277-201ENSMUST00000164923 556 ntBASIC12.46□□□□□ -0.41
Hoxb3P09026 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxb3P09026 Gm7211-201ENSMUST00000172692 1118 ntBASIC12.46□□□□□ -0.41
Hoxb3P09026 Gm8018-201ENSMUST00000173536 789 ntBASIC12.46□□□□□ -0.41
Hoxb3P09026 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.46□□□□□ -0.41
Hoxb3P09026 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxb3P09026 Gm8913-201ENSMUST00000209491 641 ntBASIC12.46□□□□□ -0.41
Hoxb3P09026 Gm45701-201ENSMUST00000212049 235 ntBASIC12.46□□□□□ -0.41
Hoxb3P09026 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.46□□□□□ -0.41
Hoxb3P09026 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.46□□□□□ -0.41
Hoxb3P09026 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.46□□□□□ -0.41
Hoxb3P09026 Gm8712-201ENSMUST00000221090 701 ntBASIC12.46□□□□□ -0.41
Hoxb3P09026 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxb3P09026 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hoxb3P09026 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms