Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.73□□□□□ -0.53
ApoeP08226 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
ApoeP08226 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.73□□□□□ -0.53
ApoeP08226 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
ApoeP08226 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
ApoeP08226 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
ApoeP08226 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ApoeP08226 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ApoeP08226 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ApoeP08226 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
ApoeP08226 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ApoeP08226 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ApoeP08226 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
ApoeP08226 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ApoeP08226 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
ApoeP08226 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ApoeP08226 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
ApoeP08226 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
ApoeP08226 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ApoeP08226 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.72□□□□□ -0.53
ApoeP08226 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.72□□□□□ -0.53
ApoeP08226 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.72□□□□□ -0.53
ApoeP08226 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ApoeP08226 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.72□□□□□ -0.53
ApoeP08226 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.72□□□□□ -0.53
ApoeP08226 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ApoeP08226 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
ApoeP08226 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.72□□□□□ -0.53
ApoeP08226 Snord83b-201ENSMUST00000104546 94 ntBASIC11.72□□□□□ -0.53
ApoeP08226 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ApoeP08226 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
ApoeP08226 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
ApoeP08226 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
ApoeP08226 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.72□□□□□ -0.53
ApoeP08226 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.72□□□□□ -0.53
ApoeP08226 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ApoeP08226 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.72□□□□□ -0.53
ApoeP08226 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.72□□□□□ -0.53
ApoeP08226 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.72□□□□□ -0.53
ApoeP08226 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.72□□□□□ -0.53
ApoeP08226 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.72□□□□□ -0.53
ApoeP08226 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.72□□□□□ -0.53
ApoeP08226 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ApoeP08226 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
ApoeP08226 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.72□□□□□ -0.53
ApoeP08226 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.72□□□□□ -0.53
ApoeP08226 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
ApoeP08226 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
ApoeP08226 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ApoeP08226 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ApoeP08226 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.72□□□□□ -0.53
ApoeP08226 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ApoeP08226 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
ApoeP08226 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
ApoeP08226 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
ApoeP08226 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
ApoeP08226 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.72□□□□□ -0.53
ApoeP08226 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
ApoeP08226 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ApoeP08226 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
ApoeP08226 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
ApoeP08226 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
ApoeP08226 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
ApoeP08226 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.71□□□□□ -0.53
ApoeP08226 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
ApoeP08226 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ApoeP08226 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
ApoeP08226 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.71□□□□□ -0.53
ApoeP08226 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
ApoeP08226 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
ApoeP08226 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.71□□□□□ -0.53
ApoeP08226 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ApoeP08226 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.71□□□□□ -0.53
ApoeP08226 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.71□□□□□ -0.53
ApoeP08226 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.71□□□□□ -0.53
ApoeP08226 Rmrp-201ENSMUST00000157463 271 ntBASIC11.71□□□□□ -0.53
ApoeP08226 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ApoeP08226 Gm17208-201ENSMUST00000168388 535 ntBASIC11.71□□□□□ -0.53
ApoeP08226 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
ApoeP08226 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.71□□□□□ -0.53
ApoeP08226 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.71□□□□□ -0.53
ApoeP08226 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ApoeP08226 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.71□□□□□ -0.53
ApoeP08226 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
ApoeP08226 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
ApoeP08226 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
ApoeP08226 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
ApoeP08226 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
ApoeP08226 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
ApoeP08226 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms