Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
P06344 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
P06344 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
P06344 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
P06344 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
P06344 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Mir877-201ENSMUST00000104738 85 ntBASIC11.06□□□□□ -0.64
P06344 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
P06344 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.06□□□□□ -0.64
P06344 Gm13570-201ENSMUST00000140763 309 ntBASIC11.06□□□□□ -0.64
P06344 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.06□□□□□ -0.64
P06344 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
P06344 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
P06344 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.06□□□□□ -0.64
P06344 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.06□□□□□ -0.64
P06344 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.06□□□□□ -0.64
P06344 Gm8712-201ENSMUST00000221090 701 ntBASIC11.06□□□□□ -0.64
P06344 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Gm10076-201ENSMUST00000073238 384 ntBASIC11.06□□□□□ -0.64
P06344 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.06□□□□□ -0.64
P06344 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
P06344 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
P06344 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.06□□□□□ -0.64
P06344 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.06□□□□□ -0.64
P06344 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.06□□□□□ -0.64
P06344 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
P06344 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P06344 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06344 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06344 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06344 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
P06344 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
P06344 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06344 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06344 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06344 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06344 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P06344 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06344 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.05□□□□□ -0.64
P06344 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06344 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06344 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.05□□□□□ -0.64
P06344 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06344 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P06344 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06344 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
P06344 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P06344 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
P06344 Gm15808-201ENSMUST00000119046 604 ntBASIC11.05□□□□□ -0.64
P06344 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.05□□□□□ -0.64
P06344 Gm14832-201ENSMUST00000121289 322 ntBASIC11.05□□□□□ -0.64
P06344 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.05□□□□□ -0.64
P06344 Gm27046-201ENSMUST00000182160 463 ntBASIC11.05□□□□□ -0.64
P06344 Gm3096-201ENSMUST00000185770 364 ntBASIC11.05□□□□□ -0.64
P06344 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.05□□□□□ -0.64
P06344 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.05□□□□□ -0.64
P06344 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06344 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06344 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06344 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06344 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
P06344 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06344 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06344 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.05□□□□□ -0.64
P06344 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
P06344 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
P06344 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.05□□□□□ -0.64
P06344 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms