Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P04224 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P04224 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
P04224 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
P04224 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
P04224 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
P04224 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
P04224 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.9□□□□□ -0.67
P04224 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.9□□□□□ -0.67
P04224 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
P04224 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
P04224 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.89□□□□□ -0.67
P04224 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
P04224 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
P04224 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.89□□□□□ -0.67
P04224 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
P04224 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.89□□□□□ -0.67
P04224 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.89□□□□□ -0.67
P04224 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
P04224 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
P04224 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.89□□□□□ -0.67
P04224 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.89□□□□□ -0.67
P04224 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
P04224 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.89□□□□□ -0.67
P04224 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
P04224 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
P04224 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
P04224 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
P04224 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
P04224 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.88□□□□□ -0.67
P04224 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.88□□□□□ -0.67
P04224 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
P04224 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
P04224 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
P04224 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
P04224 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
P04224 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
P04224 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.88□□□□□ -0.67
P04224 Gm15487-201ENSMUST00000122373 465 ntBASIC10.88□□□□□ -0.67
P04224 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
P04224 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.88□□□□□ -0.67
P04224 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
P04224 Gm27306-201ENSMUST00000183970 107 ntBASIC10.88□□□□□ -0.67
P04224 Gm27838-201ENSMUST00000184829 128 ntBASIC10.88□□□□□ -0.67
P04224 Gm28760-201ENSMUST00000185995 736 ntBASIC10.88□□□□□ -0.67
P04224 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Gm29667-201ENSMUST00000190817 490 ntBASIC10.88□□□□□ -0.67
P04224 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms