Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Gm12058-201ENSMUST00000118614 437 ntBASIC10.42□□□□□ -0.74
Hoxa3P02831 Gm13813-201ENSMUST00000120998 787 ntBASIC10.42□□□□□ -0.74
Hoxa3P02831 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.42□□□□□ -0.74
Hoxa3P02831 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.42□□□□□ -0.74
Hoxa3P02831 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Gm31256-201ENSMUST00000194705 506 ntBASIC10.42□□□□□ -0.74
Hoxa3P02831 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.42□□□□□ -0.74
Hoxa3P02831 Gm44405-201ENSMUST00000198952 126 ntBASIC10.42□□□□□ -0.74
Hoxa3P02831 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.42□□□□□ -0.74
Hoxa3P02831 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.42□□□□□ -0.74
Hoxa3P02831 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.42□□□□□ -0.74
Hoxa3P02831 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.42□□□□□ -0.74
Hoxa3P02831 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.42□□□□□ -0.74
Hoxa3P02831 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.42□□□□□ -0.74
Hoxa3P02831 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.42□□□□□ -0.74
Hoxa3P02831 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC10.42□□□□□ -0.74
Hoxa3P02831 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.42□□□□□ -0.74
Hoxa3P02831 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Hoxa3P02831 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Hoxa3P02831 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Hoxa3P02831 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Hoxa3P02831 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Hoxa3P02831 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Hoxa3P02831 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.41□□□□□ -0.74
Hoxa3P02831 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Hoxa3P02831 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.41□□□□□ -0.74
Hoxa3P02831 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Matn2-203ENSMUST00000226766 3252 ntBASIC10.41□□□□□ -0.74
Hoxa3P02831 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Hoxa3P02831 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.41□□□□□ -0.74
Hoxa3P02831 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.41□□□□□ -0.74
Hoxa3P02831 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.41□□□□□ -0.74
Hoxa3P02831 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.41□□□□□ -0.74
Hoxa3P02831 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Gm25043-201ENSMUST00000158604 212 ntBASIC10.41□□□□□ -0.74
Hoxa3P02831 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Hoxa3P02831 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.41□□□□□ -0.74
Hoxa3P02831 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.41□□□□□ -0.74
Hoxa3P02831 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.41□□□□□ -0.74
Hoxa3P02831 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.41□□□□□ -0.74
Hoxa3P02831 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Hoxa3P02831 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.41□□□□□ -0.74
Hoxa3P02831 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Hoxa3P02831 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Hoxa3P02831 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms