Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.42□□□□□ -0.26
Vti1aO89116 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Vti1aO89116 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Vti1aO89116 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.42□□□□□ -0.26
Vti1aO89116 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1aO89116 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.42□□□□□ -0.26
Vti1aO89116 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1aO89116 Gm8712-201ENSMUST00000221090 701 ntBASIC13.42□□□□□ -0.26
Vti1aO89116 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.42□□□□□ -0.26
Vti1aO89116 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1aO89116 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1aO89116 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Vti1aO89116 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1aO89116 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1aO89116 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1aO89116 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1aO89116 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1aO89116 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.42□□□□□ -0.26
Vti1aO89116 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Vti1aO89116 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1aO89116 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1aO89116 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Vti1aO89116 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vti1aO89116 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.41□□□□□ -0.26
Vti1aO89116 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.41□□□□□ -0.26
Vti1aO89116 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vti1aO89116 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vti1aO89116 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vti1aO89116 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vti1aO89116 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vti1aO89116 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.41□□□□□ -0.26
Vti1aO89116 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Vti1aO89116 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vti1aO89116 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vti1aO89116 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vti1aO89116 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vti1aO89116 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vti1aO89116 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.41□□□□□ -0.26
Vti1aO89116 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vti1aO89116 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.41□□□□□ -0.26
Vti1aO89116 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vti1aO89116 Gm42997-202ENSMUST00000200321 985 ntBASIC13.41□□□□□ -0.26
Vti1aO89116 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.41□□□□□ -0.26
Vti1aO89116 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vti1aO89116 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vti1aO89116 Gm10312-201ENSMUST00000078515 489 ntBASIC13.41□□□□□ -0.26
Vti1aO89116 Mir339-201ENSMUST00000083659 96 ntBASIC13.41□□□□□ -0.26
Vti1aO89116 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vti1aO89116 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vti1aO89116 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vti1aO89116 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vti1aO89116 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vti1aO89116 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.41□□□□□ -0.26
Vti1aO89116 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vti1aO89116 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.41□□□□□ -0.26
Vti1aO89116 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Vti1aO89116 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vti1aO89116 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.41□□□□□ -0.26
Vti1aO89116 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Vti1aO89116 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.41□□□□□ -0.26
Vti1aO89116 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vti1aO89116 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Vti1aO89116 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Vti1aO89116 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Vti1aO89116 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vti1aO89116 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vti1aO89116 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vti1aO89116 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Vti1aO89116 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Vti1aO89116 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vti1aO89116 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.4□□□□□ -0.26
Vti1aO89116 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vti1aO89116 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.4□□□□□ -0.26
Vti1aO89116 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.4□□□□□ -0.26
Vti1aO89116 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.4□□□□□ -0.26
Vti1aO89116 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.4□□□□□ -0.26
Vti1aO89116 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.4□□□□□ -0.26
Vti1aO89116 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Vti1aO89116 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.4□□□□□ -0.26
Vti1aO89116 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.4□□□□□ -0.26
Vti1aO89116 Gm28450-201ENSMUST00000187349 638 ntBASIC13.4□□□□□ -0.26
Vti1aO89116 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.4□□□□□ -0.26
Vti1aO89116 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.4□□□□□ -0.26
Vti1aO89116 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vti1aO89116 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vti1aO89116 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vti1aO89116 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Vti1aO89116 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vti1aO89116 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Vti1aO89116 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Vti1aO89116 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vti1aO89116 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Vti1aO89116 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vti1aO89116 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vti1aO89116 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Vti1aO89116 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Vti1aO89116 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Vti1aO89116 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Vti1aO89116 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Vti1aO89116 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms