Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CopeO89079 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CopeO89079 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.77□□□□□ -0.36
CopeO89079 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CopeO89079 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CopeO89079 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CopeO89079 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.77□□□□□ -0.37
CopeO89079 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CopeO89079 Gm12203-201ENSMUST00000118235 598 ntBASIC12.77□□□□□ -0.37
CopeO89079 Gm12209-201ENSMUST00000120089 596 ntBASIC12.77□□□□□ -0.37
CopeO89079 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.77□□□□□ -0.37
CopeO89079 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CopeO89079 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CopeO89079 Gm27331-201ENSMUST00000183705 60 ntBASIC12.77□□□□□ -0.37
CopeO89079 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CopeO89079 Gm4768-201ENSMUST00000206199 686 ntBASIC12.77□□□□□ -0.37
CopeO89079 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.77□□□□□ -0.37
CopeO89079 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CopeO89079 Gm10146-201ENSMUST00000072739 309 ntBASIC12.77□□□□□ -0.37
CopeO89079 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CopeO89079 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CopeO89079 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
CopeO89079 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CopeO89079 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CopeO89079 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CopeO89079 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
CopeO89079 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CopeO89079 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CopeO89079 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CopeO89079 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.77□□□□□ -0.37
CopeO89079 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
CopeO89079 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
CopeO89079 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CopeO89079 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CopeO89079 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CopeO89079 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
CopeO89079 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CopeO89079 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.76□□□□□ -0.37
CopeO89079 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopeO89079 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopeO89079 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
CopeO89079 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.76□□□□□ -0.37
CopeO89079 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopeO89079 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CopeO89079 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CopeO89079 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopeO89079 Gm11803-201ENSMUST00000119966 444 ntBASIC12.76□□□□□ -0.37
CopeO89079 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.76□□□□□ -0.37
CopeO89079 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CopeO89079 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopeO89079 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CopeO89079 Gm27437-201ENSMUST00000183429 107 ntBASIC12.76□□□□□ -0.37
CopeO89079 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CopeO89079 Gm18018-201ENSMUST00000198273 408 ntBASIC12.76□□□□□ -0.37
CopeO89079 Gm44882-201ENSMUST00000205702 802 ntBASIC12.76□□□□□ -0.37
CopeO89079 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.76□□□□□ -0.37
CopeO89079 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.76□□□□□ -0.37
CopeO89079 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.76□□□□□ -0.37
CopeO89079 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopeO89079 Gm24136-201ENSMUST00000083374 165 ntBASIC12.76□□□□□ -0.37
CopeO89079 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopeO89079 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
CopeO89079 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CopeO89079 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopeO89079 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopeO89079 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.76□□□□□ -0.37
CopeO89079 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CopeO89079 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.76□□□□□ -0.37
CopeO89079 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopeO89079 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CopeO89079 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CopeO89079 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopeO89079 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
CopeO89079 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopeO89079 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CopeO89079 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopeO89079 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopeO89079 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopeO89079 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CopeO89079 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopeO89079 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CopeO89079 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CopeO89079 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
CopeO89079 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
CopeO89079 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopeO89079 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CopeO89079 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopeO89079 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopeO89079 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CopeO89079 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CopeO89079 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CopeO89079 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopeO89079 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.75□□□□□ -0.37
CopeO89079 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.75□□□□□ -0.37
CopeO89079 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.75□□□□□ -0.37
CopeO89079 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CopeO89079 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CopeO89079 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.75□□□□□ -0.37
CopeO89079 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.75□□□□□ -0.37
CopeO89079 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms