Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Syn1O88935 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.79□□□□□ -0.36
Syn1O88935 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.79□□□□□ -0.36
Syn1O88935 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.79□□□□□ -0.36
Syn1O88935 Gm22442-201ENSMUST00000157256 144 ntBASIC12.79□□□□□ -0.36
Syn1O88935 Gm22144-201ENSMUST00000157402 102 ntBASIC12.79□□□□□ -0.36
Syn1O88935 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.79□□□□□ -0.36
Syn1O88935 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Gm26448-201ENSMUST00000082446 203 ntBASIC12.79□□□□□ -0.36
Syn1O88935 Mir339-201ENSMUST00000083659 96 ntBASIC12.79□□□□□ -0.36
Syn1O88935 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Syn1O88935 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.79□□□□□ -0.36
Syn1O88935 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Syn1O88935 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.78□□□□□ -0.36
Syn1O88935 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Syn1O88935 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Syn1O88935 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.78□□□□□ -0.36
Syn1O88935 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Syn1O88935 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Syn1O88935 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Syn1O88935 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Syn1O88935 Gm10288-201ENSMUST00000084614 537 ntBASIC12.78□□□□□ -0.36
Syn1O88935 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Syn1O88935 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.78□□□□□ -0.36
Syn1O88935 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Syn1O88935 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.78□□□□□ -0.36
Syn1O88935 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Syn1O88935 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.78□□□□□ -0.36
Syn1O88935 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Syn1O88935 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Syn1O88935 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.77□□□□□ -0.36
Syn1O88935 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Syn1O88935 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Syn1O88935 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.77□□□□□ -0.36
Syn1O88935 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Syn1O88935 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Syn1O88935 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Syn1O88935 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Syn1O88935 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syn1O88935 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Syn1O88935 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Syn1O88935 Gm13937-201ENSMUST00000121000 988 ntBASIC12.77□□□□□ -0.37
Syn1O88935 Gm16296-201ENSMUST00000159905 325 ntBASIC12.77□□□□□ -0.37
Syn1O88935 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Syn1O88935 Gm6485-201ENSMUST00000160676 439 ntBASIC12.77□□□□□ -0.37
Syn1O88935 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.77□□□□□ -0.37
Syn1O88935 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.77□□□□□ -0.37
Syn1O88935 Gm44329-201ENSMUST00000197469 112 ntBASIC12.77□□□□□ -0.37
Syn1O88935 Gm43610-201ENSMUST00000199117 365 ntBASIC12.77□□□□□ -0.37
Syn1O88935 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.77□□□□□ -0.37
Syn1O88935 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syn1O88935 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.77□□□□□ -0.37
Syn1O88935 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.77□□□□□ -0.37
Syn1O88935 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syn1O88935 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syn1O88935 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Syn1O88935 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Syn1O88935 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Syn1O88935 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms