Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pdlim1O70400 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Pdlim1O70400 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pdlim1O70400 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim1O70400 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim1O70400 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim1O70400 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim1O70400 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim1O70400 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.28□□□□□ -0.44
Pdlim1O70400 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim1O70400 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim1O70400 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Pdlim1O70400 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim1O70400 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim1O70400 Gm11930-201ENSMUST00000117788 190 ntBASIC12.28□□□□□ -0.44
Pdlim1O70400 Gm15547-201ENSMUST00000122152 333 ntBASIC12.28□□□□□ -0.44
Pdlim1O70400 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim1O70400 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.28□□□□□ -0.44
Pdlim1O70400 Gm43438-201ENSMUST00000198133 379 ntBASIC12.28□□□□□ -0.44
Pdlim1O70400 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Pdlim1O70400 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.28□□□□□ -0.44
Pdlim1O70400 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Pdlim1O70400 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.28□□□□□ -0.44
Pdlim1O70400 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim1O70400 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pdlim1O70400 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim1O70400 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim1O70400 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.28□□□□□ -0.44
Pdlim1O70400 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.28□□□□□ -0.44
Pdlim1O70400 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim1O70400 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim1O70400 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim1O70400 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Pdlim1O70400 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim1O70400 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim1O70400 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim1O70400 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim1O70400 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim1O70400 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Pdlim1O70400 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Pdlim1O70400 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pdlim1O70400 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Pdlim1O70400 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pdlim1O70400 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pdlim1O70400 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.44
Pdlim1O70400 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pdlim1O70400 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pdlim1O70400 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pdlim1O70400 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Pdlim1O70400 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Pdlim1O70400 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pdlim1O70400 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pdlim1O70400 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.27□□□□□ -0.44
Pdlim1O70400 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pdlim1O70400 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pdlim1O70400 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Pdlim1O70400 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Pdlim1O70400 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pdlim1O70400 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Pdlim1O70400 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Pdlim1O70400 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pdlim1O70400 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Pdlim1O70400 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.27□□□□□ -0.44
Pdlim1O70400 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim1O70400 Gm24255-201ENSMUST00000104481 128 ntBASIC12.27□□□□□ -0.45
Pdlim1O70400 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim1O70400 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.27□□□□□ -0.45
Pdlim1O70400 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.27□□□□□ -0.45
Pdlim1O70400 Gm24845-201ENSMUST00000158034 109 ntBASIC12.27□□□□□ -0.45
Pdlim1O70400 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim1O70400 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
Pdlim1O70400 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim1O70400 Gm43758-201ENSMUST00000199500 367 ntBASIC12.27□□□□□ -0.45
Pdlim1O70400 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.27□□□□□ -0.45
Pdlim1O70400 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim1O70400 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.27□□□□□ -0.45
Pdlim1O70400 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim1O70400 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim1O70400 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim1O70400 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim1O70400 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Pdlim1O70400 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Pdlim1O70400 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Pdlim1O70400 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim1O70400 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Pdlim1O70400 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Pdlim1O70400 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim1O70400 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim1O70400 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Pdlim1O70400 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.27□□□□□ -0.45
Pdlim1O70400 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim1O70400 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim1O70400 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim1O70400 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Pdlim1O70400 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms