Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.54□□□□□ -0.4
ChkaO54804 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ChkaO54804 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ChkaO54804 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ChkaO54804 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ChkaO54804 Gm22058-201ENSMUST00000083393 310 ntBASIC12.54□□□□□ -0.4
ChkaO54804 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ChkaO54804 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.54□□□□□ -0.4
ChkaO54804 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ChkaO54804 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ChkaO54804 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ChkaO54804 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ChkaO54804 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ChkaO54804 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ChkaO54804 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ChkaO54804 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ChkaO54804 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ChkaO54804 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
ChkaO54804 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.54□□□□□ -0.4
ChkaO54804 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.54□□□□□ -0.4
ChkaO54804 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ChkaO54804 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.54□□□□□ -0.4
ChkaO54804 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ChkaO54804 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
ChkaO54804 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ChkaO54804 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ChkaO54804 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ChkaO54804 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ChkaO54804 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.54□□□□□ -0.4
ChkaO54804 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
ChkaO54804 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ChkaO54804 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
ChkaO54804 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.53□□□□□ -0.4
ChkaO54804 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.53□□□□□ -0.4
ChkaO54804 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 Gm8018-201ENSMUST00000173536 789 ntBASIC12.53□□□□□ -0.4
ChkaO54804 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.53□□□□□ -0.4
ChkaO54804 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ChkaO54804 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ChkaO54804 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.53□□□□□ -0.4
ChkaO54804 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ChkaO54804 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.53□□□□□ -0.4
ChkaO54804 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
ChkaO54804 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ChkaO54804 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ChkaO54804 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.52□□□□□ -0.4
ChkaO54804 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ChkaO54804 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ChkaO54804 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
ChkaO54804 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ChkaO54804 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ChkaO54804 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.52□□□□□ -0.4
ChkaO54804 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ChkaO54804 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ChkaO54804 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
ChkaO54804 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ChkaO54804 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ChkaO54804 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.52□□□□□ -0.41
ChkaO54804 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.52□□□□□ -0.41
ChkaO54804 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
ChkaO54804 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
ChkaO54804 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ChkaO54804 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ChkaO54804 Gm8738-201ENSMUST00000172606 329 ntBASIC12.52□□□□□ -0.41
ChkaO54804 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ChkaO54804 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.52□□□□□ -0.41
ChkaO54804 Gm43818-201ENSMUST00000200605 466 ntBASIC12.52□□□□□ -0.41
ChkaO54804 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.52□□□□□ -0.41
ChkaO54804 Gm40466-201ENSMUST00000212174 422 ntBASIC12.52□□□□□ -0.41
ChkaO54804 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.52□□□□□ -0.41
ChkaO54804 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
ChkaO54804 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ChkaO54804 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ChkaO54804 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
ChkaO54804 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms