Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.58□□□□□ -0.56
Hps1O08983 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hps1O08983 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hps1O08983 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hps1O08983 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hps1O08983 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.58□□□□□ -0.56
Hps1O08983 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hps1O08983 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hps1O08983 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hps1O08983 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.58□□□□□ -0.56
Hps1O08983 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hps1O08983 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hps1O08983 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hps1O08983 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hps1O08983 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.58□□□□□ -0.56
Hps1O08983 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC11.57□□□□□ -0.56
Hps1O08983 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Hps1O08983 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.57□□□□□ -0.56
Hps1O08983 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Hps1O08983 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.57□□□□□ -0.56
Hps1O08983 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Hps1O08983 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.57□□□□□ -0.56
Hps1O08983 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Hps1O08983 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.57□□□□□ -0.56
Hps1O08983 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Gm5187-201ENSMUST00000117317 991 ntBASIC11.57□□□□□ -0.56
Hps1O08983 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Hps1O08983 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.57□□□□□ -0.56
Hps1O08983 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.57□□□□□ -0.56
Hps1O08983 Gm43822-201ENSMUST00000200285 476 ntBASIC11.57□□□□□ -0.56
Hps1O08983 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Gm45880-201ENSMUST00000213041 853 ntBASIC11.57□□□□□ -0.56
Hps1O08983 Gm6983-201ENSMUST00000214912 628 ntBASIC11.57□□□□□ -0.56
Hps1O08983 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.57□□□□□ -0.56
Hps1O08983 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.57□□□□□ -0.56
Hps1O08983 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.57□□□□□ -0.56
Hps1O08983 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hps1O08983 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hps1O08983 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.56□□□□□ -0.56
Hps1O08983 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hps1O08983 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hps1O08983 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hps1O08983 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Hps1O08983 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hps1O08983 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Hps1O08983 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Hps1O08983 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hps1O08983 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hps1O08983 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hps1O08983 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hps1O08983 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hps1O08983 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.56□□□□□ -0.56
Hps1O08983 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.56□□□□□ -0.56
Hps1O08983 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hps1O08983 Gm14723-201ENSMUST00000118686 215 ntBASIC11.56□□□□□ -0.56
Hps1O08983 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.56□□□□□ -0.56
Hps1O08983 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.56□□□□□ -0.56
Hps1O08983 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hps1O08983 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.56□□□□□ -0.56
Hps1O08983 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.56□□□□□ -0.56
Hps1O08983 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hps1O08983 Gm42550-201ENSMUST00000201553 960 ntBASIC11.56□□□□□ -0.56
Hps1O08983 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hps1O08983 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.56□□□□□ -0.56
Hps1O08983 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.56□□□□□ -0.56
Hps1O08983 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.56□□□□□ -0.56
Hps1O08983 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.56□□□□□ -0.56
Hps1O08983 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Hps1O08983 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hps1O08983 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hps1O08983 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms