Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Ube3aO08759 Gm16296-201ENSMUST00000159905 325 ntBASIC13.4□□□□□ -0.26
Ube3aO08759 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3aO08759 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ube3aO08759 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3aO08759 Gm37042-201ENSMUST00000193816 581 ntBASIC13.4□□□□□ -0.26
Ube3aO08759 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.4□□□□□ -0.26
Ube3aO08759 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.4□□□□□ -0.26
Ube3aO08759 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3aO08759 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3aO08759 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3aO08759 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3aO08759 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3aO08759 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ube3aO08759 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ube3aO08759 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.39□□□□□ -0.27
Ube3aO08759 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.39□□□□□ -0.27
Ube3aO08759 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Ube3aO08759 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Gm16479-201ENSMUST00000121706 932 ntBASIC13.39□□□□□ -0.27
Ube3aO08759 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.39□□□□□ -0.27
Ube3aO08759 Gm17208-201ENSMUST00000168388 535 ntBASIC13.39□□□□□ -0.27
Ube3aO08759 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ube3aO08759 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Gm8602-201ENSMUST00000184045 607 ntBASIC13.39□□□□□ -0.27
Ube3aO08759 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ube3aO08759 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.39□□□□□ -0.27
Ube3aO08759 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ube3aO08759 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Ube3aO08759 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ube3aO08759 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Ube3aO08759 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC13.39□□□□□ -0.27
Ube3aO08759 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ube3aO08759 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ube3aO08759 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Ube3aO08759 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ube3aO08759 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube3aO08759 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube3aO08759 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ube3aO08759 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube3aO08759 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube3aO08759 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.38□□□□□ -0.27
Ube3aO08759 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube3aO08759 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ube3aO08759 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Ube3aO08759 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube3aO08759 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ube3aO08759 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.38□□□□□ -0.27
Ube3aO08759 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.38□□□□□ -0.27
Ube3aO08759 Gm26185-201ENSMUST00000157692 266 ntBASIC13.38□□□□□ -0.27
Ube3aO08759 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
Ube3aO08759 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube3aO08759 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube3aO08759 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ube3aO08759 Gm37922-201ENSMUST00000195596 455 ntBASIC13.38□□□□□ -0.27
Ube3aO08759 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.38□□□□□ -0.27
Ube3aO08759 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.38□□□□□ -0.27
Ube3aO08759 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Ube3aO08759 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube3aO08759 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
Ube3aO08759 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube3aO08759 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ube3aO08759 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Ube3aO08759 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube3aO08759 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ube3aO08759 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube3aO08759 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube3aO08759 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ube3aO08759 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ube3aO08759 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.38□□□□□ -0.27
Ube3aO08759 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.38□□□□□ -0.27
Ube3aO08759 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms