Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Gm23363-201ENSMUST00000175024 79 ntBASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Auts2-212ENSMUST00000178555 309 ntBASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Gm28631-201ENSMUST00000190740 334 ntBASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Gm42599-201ENSMUST00000201308 469 ntBASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.29□□□□□ -0.6
Shisa8J3QNX5 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Gm14921-201ENSMUST00000118643 908 ntBASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Gm16296-201ENSMUST00000159905 325 ntBASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Gm2495-201ENSMUST00000191160 466 ntBASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Gm8598-201ENSMUST00000221184 836 ntBASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.28□□□□□ -0.6
Shisa8J3QNX5 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Shisa8J3QNX5 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Shisa8J3QNX5 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Shisa8J3QNX5 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Shisa8J3QNX5 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Shisa8J3QNX5 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Shisa8J3QNX5 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Shisa8J3QNX5 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Shisa8J3QNX5 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Shisa8J3QNX5 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.27□□□□□ -0.61
Shisa8J3QNX5 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Shisa8J3QNX5 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shisa8J3QNX5 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.27□□□□□ -0.61
Shisa8J3QNX5 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Shisa8J3QNX5 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.27□□□□□ -0.61
Shisa8J3QNX5 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.27□□□□□ -0.61
Shisa8J3QNX5 Gm24231-201ENSMUST00000104315 133 ntBASIC11.27□□□□□ -0.61
Shisa8J3QNX5 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Shisa8J3QNX5 Gm16479-201ENSMUST00000121706 932 ntBASIC11.27□□□□□ -0.61
Shisa8J3QNX5 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms