Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC22.29■■□□□ 1.16
Ccdc180J3QNE4 AC166344.1-201ENSMUST00000223745 674 ntBASIC22.29■■□□□ 1.16
Ccdc180J3QNE4 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ccdc180J3QNE4 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Ccdc180J3QNE4 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Ccdc180J3QNE4 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
Ccdc180J3QNE4 Gm28323-201ENSMUST00000186817 2499 ntBASIC22.28■■□□□ 1.16
Ccdc180J3QNE4 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ccdc180J3QNE4 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ccdc180J3QNE4 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ccdc180J3QNE4 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ccdc180J3QNE4 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Ccdc180J3QNE4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ccdc180J3QNE4 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ccdc180J3QNE4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ccdc180J3QNE4 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC22.28■■□□□ 1.16
Ccdc180J3QNE4 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ccdc180J3QNE4 Gm8737-201ENSMUST00000122208 642 ntBASIC22.28■■□□□ 1.16
Ccdc180J3QNE4 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC22.28■■□□□ 1.16
Ccdc180J3QNE4 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ccdc180J3QNE4 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Ccdc180J3QNE4 Gm7593-201ENSMUST00000187246 644 ntBASIC22.28■■□□□ 1.16
Ccdc180J3QNE4 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Ccdc180J3QNE4 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ccdc180J3QNE4 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ccdc180J3QNE4 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ccdc180J3QNE4 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC22.28■■□□□ 1.16
Ccdc180J3QNE4 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ccdc180J3QNE4 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Ccdc180J3QNE4 Gm13328-201ENSMUST00000120816 1020 ntBASIC22.27■■□□□ 1.16
Ccdc180J3QNE4 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC22.27■■□□□ 1.16
Ccdc180J3QNE4 Gm2553-201ENSMUST00000215986 605 ntBASIC22.27■■□□□ 1.16
Ccdc180J3QNE4 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ccdc180J3QNE4 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Ccdc180J3QNE4 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ccdc180J3QNE4 Gm18198-201ENSMUST00000204986 1551 ntBASIC22.27■■□□□ 1.16
Ccdc180J3QNE4 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ccdc180J3QNE4 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ccdc180J3QNE4 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 Gm5879-201ENSMUST00000089501 1209 ntBASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ccdc180J3QNE4 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Ccdc180J3QNE4 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Ccdc180J3QNE4 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc180J3QNE4 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc180J3QNE4 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Ccdc180J3QNE4 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc180J3QNE4 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC22.25■■□□□ 1.15
Ccdc180J3QNE4 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc180J3QNE4 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc180J3QNE4 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc180J3QNE4 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC22.25■■□□□ 1.15
Ccdc180J3QNE4 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc180J3QNE4 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC22.25■■□□□ 1.15
Ccdc180J3QNE4 Gm34023-201ENSMUST00000195539 217 ntBASIC22.25■■□□□ 1.15
Ccdc180J3QNE4 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc180J3QNE4 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc180J3QNE4 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Ccdc180J3QNE4 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc180J3QNE4 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc180J3QNE4 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Ccdc180J3QNE4 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc180J3QNE4 CT009489.1-201ENSMUST00000227740 1893 ntBASIC22.25■■□□□ 1.15
Ccdc180J3QNE4 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ccdc180J3QNE4 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ccdc180J3QNE4 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC22.24■■□□□ 1.15
Ccdc180J3QNE4 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ccdc180J3QNE4 Gm11660-201ENSMUST00000120955 412 ntBASIC22.24■■□□□ 1.15
Ccdc180J3QNE4 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC22.24■■□□□ 1.15
Ccdc180J3QNE4 Gm9192-201ENSMUST00000183221 985 ntBASIC22.24■■□□□ 1.15
Ccdc180J3QNE4 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC22.24■■□□□ 1.15
Ccdc180J3QNE4 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC22.24■■□□□ 1.15
Ccdc180J3QNE4 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ccdc180J3QNE4 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC22.24■■□□□ 1.15
Ccdc180J3QNE4 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC22.24■■□□□ 1.15
Ccdc180J3QNE4 Gm5451-201ENSMUST00000080545 579 ntBASIC22.24■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms