Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 Gm11892-201ENSMUST00000117711 1202 ntBASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 Mir1956-201ENSMUST00000157748 65 ntBASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 Gm28937-201ENSMUST00000185413 695 ntBASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 Gm29400-201ENSMUST00000187208 695 ntBASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 Gm28662-201ENSMUST00000188446 695 ntBASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 Gm28251-201ENSMUST00000188835 695 ntBASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 Gm37318-201ENSMUST00000194325 695 ntBASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 Gm38017-201ENSMUST00000194768 695 ntBASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 Gm37287-201ENSMUST00000195449 695 ntBASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 Gm37793-201ENSMUST00000195548 695 ntBASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcf11G3X9Z4 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pcf11G3X9Z4 Gm44152-201ENSMUST00000205007 1691 ntBASIC18.46■□□□□ 0.54
Pcf11G3X9Z4 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Pcf11G3X9Z4 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Gm11949-201ENSMUST00000117640 372 ntBASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Gm15172-201ENSMUST00000118945 1046 ntBASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Gm15610-201ENSMUST00000120584 195 ntBASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 AC159103.1-201ENSMUST00000228325 429 ntBASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Gm18198-201ENSMUST00000204986 1551 ntBASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Gm18983-201ENSMUST00000222884 2729 ntBASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pcf11G3X9Z4 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Gm11956-201ENSMUST00000119525 512 ntBASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Gm14665-201ENSMUST00000122294 557 ntBASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Mir6958-201ENSMUST00000184207 73 ntBASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Gm7940-201ENSMUST00000218195 769 ntBASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pcf11G3X9Z4 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcf11G3X9Z4 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcf11G3X9Z4 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcf11G3X9Z4 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcf11G3X9Z4 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcf11G3X9Z4 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pcf11G3X9Z4 Gm18159-201ENSMUST00000174516 1070 ntBASIC18.43■□□□□ 0.54
Pcf11G3X9Z4 Kcnk16-202ENSMUST00000225596 2127 ntBASIC18.43■□□□□ 0.54
Pcf11G3X9Z4 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcf11G3X9Z4 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Pcf11G3X9Z4 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcf11G3X9Z4 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC18.43■□□□□ 0.54
Pcf11G3X9Z4 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC18.43■□□□□ 0.54
Pcf11G3X9Z4 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pcf11G3X9Z4 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms