Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Gm43125-201ENSMUST00000201724 730 ntBASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trim55G3X8Y1 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim55G3X8Y1 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Gm25948-201ENSMUST00000175334 112 ntBASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim55G3X8Y1 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trim55G3X8Y1 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trim55G3X8Y1 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms