Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.12□□□□□ -0.63
Shank1D3YZU1 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.12□□□□□ -0.63
Shank1D3YZU1 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Shank1D3YZU1 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Gm8199-201ENSMUST00000121323 823 ntBASIC11.11□□□□□ -0.63
Shank1D3YZU1 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Gm23218-201ENSMUST00000158124 276 ntBASIC11.11□□□□□ -0.63
Shank1D3YZU1 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.11□□□□□ -0.63
Shank1D3YZU1 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.11□□□□□ -0.63
Shank1D3YZU1 Gm5455-201ENSMUST00000058710 715 ntBASIC11.11□□□□□ -0.63
Shank1D3YZU1 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.11□□□□□ -0.63
Shank1D3YZU1 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.11□□□□□ -0.63
Shank1D3YZU1 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.11□□□□□ -0.63
Shank1D3YZU1 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Gm34023-201ENSMUST00000195539 217 ntBASIC11.11□□□□□ -0.63
Shank1D3YZU1 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.11□□□□□ -0.63
Shank1D3YZU1 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.11□□□□□ -0.63
Shank1D3YZU1 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Shank1D3YZU1 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shank1D3YZU1 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms