Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Gm12742-201ENSMUST00000117326 410 ntBASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Gm2231-201ENSMUST00000125661 612 ntBASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Gm28693-202ENSMUST00000190758 331 ntBASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.6□□□□□ -0.23
Trim30cD3YVI9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim30cD3YVI9 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Gm7029-201ENSMUST00000173226 450 ntBASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Gm43438-201ENSMUST00000198133 379 ntBASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Gm6458-201ENSMUST00000211573 635 ntBASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Gm10268-201ENSMUST00000085340 555 ntBASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim30cD3YVI9 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Trim30cD3YVI9 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trim30cD3YVI9 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Trim30cD3YVI9 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Trim30cD3YVI9 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Trim30cD3YVI9 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trim30cD3YVI9 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim30cD3YVI9 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim30cD3YVI9 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim30cD3YVI9 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim30cD3YVI9 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim30cD3YVI9 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.58□□□□□ -0.24
Trim30cD3YVI9 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.58□□□□□ -0.24
Trim30cD3YVI9 Gm16479-201ENSMUST00000121706 932 ntBASIC13.58□□□□□ -0.24
Trim30cD3YVI9 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.58□□□□□ -0.24
Trim30cD3YVI9 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.58□□□□□ -0.24
Trim30cD3YVI9 Gm26927-201ENSMUST00000182385 965 ntBASIC13.58□□□□□ -0.24
Trim30cD3YVI9 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.58□□□□□ -0.24
Trim30cD3YVI9 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim30cD3YVI9 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms