Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.33□□□□□ -0.12
Clrn2B2RVW2 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn2B2RVW2 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.33□□□□□ -0.12
Clrn2B2RVW2 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Clrn2B2RVW2 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.33□□□□□ -0.12
Clrn2B2RVW2 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn2B2RVW2 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Clrn2B2RVW2 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Clrn2B2RVW2 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn2B2RVW2 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn2B2RVW2 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn2B2RVW2 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn2B2RVW2 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.33□□□□□ -0.12
Clrn2B2RVW2 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC14.33□□□□□ -0.12
Clrn2B2RVW2 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC14.33□□□□□ -0.12
Clrn2B2RVW2 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn2B2RVW2 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn2B2RVW2 CT030637.1-201ENSMUST00000228016 669 ntBASIC14.33□□□□□ -0.12
Clrn2B2RVW2 AC159103.1-201ENSMUST00000228325 429 ntBASIC14.33□□□□□ -0.12
Clrn2B2RVW2 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn2B2RVW2 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.33□□□□□ -0.12
Clrn2B2RVW2 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Clrn2B2RVW2 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn2B2RVW2 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn2B2RVW2 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Clrn2B2RVW2 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn2B2RVW2 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.33□□□□□ -0.12
Clrn2B2RVW2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Clrn2B2RVW2 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Gm4607-201ENSMUST00000206649 577 ntBASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clrn2B2RVW2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Gm15573-201ENSMUST00000119487 540 ntBASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Gm8199-201ENSMUST00000121323 823 ntBASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Gm14760-201ENSMUST00000121831 999 ntBASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Gm6905-201ENSMUST00000205729 511 ntBASIC14.31□□□□□ -0.12
Clrn2B2RVW2 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clrn2B2RVW2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clrn2B2RVW2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms