Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rrn3B2RS91 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.52□□□□□ -0.41
Rrn3B2RS91 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrn3B2RS91 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrn3B2RS91 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrn3B2RS91 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrn3B2RS91 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrn3B2RS91 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
Rrn3B2RS91 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrn3B2RS91 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrn3B2RS91 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rrn3B2RS91 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrn3B2RS91 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rrn3B2RS91 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rrn3B2RS91 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.51□□□□□ -0.41
Rrn3B2RS91 Rmrp-201ENSMUST00000157463 271 ntBASIC12.51□□□□□ -0.41
Rrn3B2RS91 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Gm2546-201ENSMUST00000182630 991 ntBASIC12.51□□□□□ -0.41
Rrn3B2RS91 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Gm37201-201ENSMUST00000191845 523 ntBASIC12.51□□□□□ -0.41
Rrn3B2RS91 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrn3B2RS91 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.51□□□□□ -0.41
Rrn3B2RS91 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.51□□□□□ -0.41
Rrn3B2RS91 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.51□□□□□ -0.41
Rrn3B2RS91 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.51□□□□□ -0.41
Rrn3B2RS91 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.51□□□□□ -0.41
Rrn3B2RS91 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Rrn3B2RS91 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Gm13736-201ENSMUST00000119272 253 ntBASIC12.5□□□□□ -0.41
Rrn3B2RS91 Gm14381-201ENSMUST00000122105 414 ntBASIC12.5□□□□□ -0.41
Rrn3B2RS91 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.5□□□□□ -0.41
Rrn3B2RS91 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.5□□□□□ -0.41
Rrn3B2RS91 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.5□□□□□ -0.41
Rrn3B2RS91 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Cts7-204ENSMUST00000225321 1257 ntBASIC12.5□□□□□ -0.41
Rrn3B2RS91 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.5□□□□□ -0.41
Rrn3B2RS91 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rrn3B2RS91 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Rrn3B2RS91 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Rrn3B2RS91 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rrn3B2RS91 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rrn3B2RS91 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rrn3B2RS91 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms