Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.5□□□□□ -0.41
Col4a6B1AVK5 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Map1b-203ENSMUST00000223725 2669 ntBASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Gm11801-201ENSMUST00000117807 746 ntBASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Gm11783-201ENSMUST00000119549 885 ntBASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Gm7940-201ENSMUST00000218195 769 ntBASIC12.49□□□□□ -0.41
Col4a6B1AVK5 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Gm23680-201ENSMUST00000083162 164 ntBASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Col4a6B1AVK5 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Gm15610-201ENSMUST00000120584 195 ntBASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Gm7504-201ENSMUST00000201449 424 ntBASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Gm18059-201ENSMUST00000208073 580 ntBASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Gm8894-201ENSMUST00000074642 666 ntBASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Gm22877-201ENSMUST00000175451 105 ntBASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.48□□□□□ -0.41
Col4a6B1AVK5 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Mir483-201ENSMUST00000093631 73 ntBASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col4a6B1AVK5 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms