Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trav6n-6A0A075B6B2 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm9755-201ENSMUST00000032981 1356 ntBASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm19184-201ENSMUST00000196798 928 ntBASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm9816-201ENSMUST00000122292 1414 ntBASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Trav6n-6A0A075B6B2 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Trav6n-6A0A075B6B2 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav6n-6A0A075B6B2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav6n-6A0A075B6B2 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Trav6n-6A0A075B6B2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Gm13689-201ENSMUST00000119360 685 ntBASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Gm11424-201ENSMUST00000121929 829 ntBASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Gm38671-201ENSMUST00000200573 130 ntBASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Gm38187-201ENSMUST00000195609 4709 ntBASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 AC126257.2-201ENSMUST00000215507 2300 ntBASIC9.27□□□□□ -0.93
Trav6n-6A0A075B6B2 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms