Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Gm14921-201ENSMUST00000118643 908 ntBASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Cd63-ps-201ENSMUST00000145417 875 ntBASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Gm44344-201ENSMUST00000200287 129 ntBASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Gm17230-201ENSMUST00000171194 3942 ntBASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Gm19692-201ENSMUST00000203856 2084 ntBASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Gm43622-201ENSMUST00000200140 2019 ntBASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Trav7n-4A0A075B620 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Gm29100-201ENSMUST00000187564 4410 ntBASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Gm5303-201ENSMUST00000117943 1252 ntBASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Gm8000-201ENSMUST00000188378 592 ntBASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Gm7774-201ENSMUST00000200064 533 ntBASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Gm7537-201ENSMUST00000221660 1414 ntBASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Gm43868-201ENSMUST00000205187 2114 ntBASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 AC154404.1-201ENSMUST00000223601 2077 ntBASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav7n-4A0A075B620 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 106.1 ms