Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Cog3-203ENSMUST00000227473 4197 ntBASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
H2afb2S4R1M3 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Gm12058-201ENSMUST00000118614 437 ntBASIC12.4□□□□□ -0.42
H2afb2S4R1M3 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Gm23119-201ENSMUST00000158610 140 ntBASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Gm27023-201ENSMUST00000182372 285 ntBASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Gm44882-201ENSMUST00000205702 802 ntBASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
H2afb2S4R1M3 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
H2afb2S4R1M3 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
H2afb2S4R1M3 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
H2afb2S4R1M3 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
H2afb2S4R1M3 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
H2afb2S4R1M3 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
H2afb2S4R1M3 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
H2afb2S4R1M3 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
H2afb2S4R1M3 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Gm10434-201ENSMUST00000101158 471 ntBASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Gm13316-201ENSMUST00000140537 691 ntBASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb2S4R1M3 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb2S4R1M3 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Gm44958-201ENSMUST00000203734 736 ntBASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Gm39404-201ENSMUST00000216350 313 ntBASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Gm25857-201ENSMUST00000082788 129 ntBASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
H2afb2S4R1M3 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Matn2-203ENSMUST00000226766 3252 ntBASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
H2afb2S4R1M3 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms