Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
H2afb3S4R1G7 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
H2afb3S4R1G7 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
H2afb3S4R1G7 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
H2afb3S4R1G7 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
H2afb3S4R1G7 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
H2afb3S4R1G7 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Gm22331-201ENSMUST00000158066 136 ntBASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.2□□□□□ -0.62
H2afb3S4R1G7 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.19□□□□□ -0.62
H2afb3S4R1G7 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Gm8652-201ENSMUST00000181363 964 ntBASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Gm24526-201ENSMUST00000082921 158 ntBASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
H2afb3S4R1G7 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms