Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lhx9Q9WUH2 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Gm14028-201ENSMUST00000117434 479 ntBASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Gm23119-201ENSMUST00000158610 140 ntBASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Gm27341-201ENSMUST00000183570 106 ntBASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Gm43138-201ENSMUST00000199123 708 ntBASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lhx9Q9WUH2 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Gm19208-201ENSMUST00000213861 912 ntBASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lhx9Q9WUH2 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms