Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
Rnf4Q9QZS2 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Gm12384-201ENSMUST00000119228 919 ntBASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf4Q9QZS2 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf4Q9QZS2 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf4Q9QZS2 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf4Q9QZS2 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.52□□□□□ -0.4
Rnf4Q9QZS2 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf4Q9QZS2 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf4Q9QZS2 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.52□□□□□ -0.4
Rnf4Q9QZS2 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf4Q9QZS2 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf4Q9QZS2 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf4Q9QZS2 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf4Q9QZS2 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Gm15703-201ENSMUST00000120250 880 ntBASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.52□□□□□ -0.41
Rnf4Q9QZS2 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf4Q9QZS2 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms