Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Phtf1Q9QZ09 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Phtf1Q9QZ09 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Phtf1Q9QZ09 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Gm12015-201ENSMUST00000117065 843 ntBASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Gm14109-201ENSMUST00000118814 309 ntBASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Gm27320-201ENSMUST00000184892 109 ntBASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Gm19994-201ENSMUST00000217086 586 ntBASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Phtf1Q9QZ09 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Gm14644-201ENSMUST00000116671 647 ntBASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Gm38317-201ENSMUST00000195564 343 ntBASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Phtf1Q9QZ09 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Phtf1Q9QZ09 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Phtf1Q9QZ09 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.59□□□□□ -0.23
Phtf1Q9QZ09 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Phtf1Q9QZ09 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.59□□□□□ -0.23
Phtf1Q9QZ09 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Phtf1Q9QZ09 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Phtf1Q9QZ09 Gm24934-201ENSMUST00000103764 111 ntBASIC13.59□□□□□ -0.23
Phtf1Q9QZ09 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.59□□□□□ -0.23
Phtf1Q9QZ09 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.59□□□□□ -0.23
Phtf1Q9QZ09 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.59□□□□□ -0.23
Phtf1Q9QZ09 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Phtf1Q9QZ09 Gm5070-201ENSMUST00000177599 862 ntBASIC13.59□□□□□ -0.23
Phtf1Q9QZ09 Gm27046-201ENSMUST00000182160 463 ntBASIC13.59□□□□□ -0.23
Phtf1Q9QZ09 Gm44967-201ENSMUST00000207047 631 ntBASIC13.59□□□□□ -0.23
Phtf1Q9QZ09 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms