Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Gm11591-201ENSMUST00000120063 702 ntBASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Mir8109-201ENSMUST00000184375 117 ntBASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Gm29396-201ENSMUST00000185659 716 ntBASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Gm37042-201ENSMUST00000193816 581 ntBASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Olfr284-202ENSMUST00000206647 966 ntBASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Gm18935-201ENSMUST00000212692 664 ntBASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Gm45930-201ENSMUST00000221330 292 ntBASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Gm7809-201ENSMUST00000153199 742 ntBASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Mir339-201ENSMUST00000083659 96 ntBASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tubb3Q9ERD7 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.33□□□□□ -0.43
Tubb3Q9ERD7 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Tubb3Q9ERD7 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Tubb3Q9ERD7 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Tubb3Q9ERD7 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Tubb3Q9ERD7 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Tubb3Q9ERD7 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms