Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm13665-201ENSMUST00000120830 528 ntBASIC16.31■□□□□ 0.2
U2af1Q9D883 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
U2af1Q9D883 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC16.31■□□□□ 0.2
U2af1Q9D883 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC16.31■□□□□ 0.2
U2af1Q9D883 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
U2af1Q9D883 Gm4959-201ENSMUST00000197271 1044 ntBASIC16.31■□□□□ 0.2
U2af1Q9D883 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC16.31■□□□□ 0.2
U2af1Q9D883 AC163667.3-201ENSMUST00000225774 222 ntBASIC16.31■□□□□ 0.2
U2af1Q9D883 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
U2af1Q9D883 Gm9996-201ENSMUST00000070359 913 ntBASIC16.31■□□□□ 0.2
U2af1Q9D883 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
U2af1Q9D883 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
U2af1Q9D883 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
U2af1Q9D883 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
U2af1Q9D883 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
U2af1Q9D883 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
U2af1Q9D883 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
U2af1Q9D883 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
U2af1Q9D883 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
U2af1Q9D883 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
U2af1Q9D883 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
U2af1Q9D883 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
U2af1Q9D883 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
U2af1Q9D883 Gm43908-201ENSMUST00000205074 1472 ntBASIC16.3■□□□□ 0.2
U2af1Q9D883 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
U2af1Q9D883 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
U2af1Q9D883 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
U2af1Q9D883 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
U2af1Q9D883 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
U2af1Q9D883 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
U2af1Q9D883 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
U2af1Q9D883 Gm14644-201ENSMUST00000116671 647 ntBASIC16.3■□□□□ 0.2
U2af1Q9D883 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
U2af1Q9D883 Gm2383-201ENSMUST00000181461 807 ntBASIC16.3■□□□□ 0.2
U2af1Q9D883 Gm8856-201ENSMUST00000185254 1144 ntBASIC16.3■□□□□ 0.2
U2af1Q9D883 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC16.3■□□□□ 0.2
U2af1Q9D883 Gm44651-201ENSMUST00000207343 372 ntBASIC16.3■□□□□ 0.2
U2af1Q9D883 CT573034.1-201ENSMUST00000222983 313 ntBASIC16.3■□□□□ 0.2
U2af1Q9D883 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
U2af1Q9D883 Dhrs4-202ENSMUST00000226168 828 ntBASIC16.3■□□□□ 0.2
U2af1Q9D883 AC123665.1-201ENSMUST00000228204 438 ntBASIC16.3■□□□□ 0.2
U2af1Q9D883 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
U2af1Q9D883 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
U2af1Q9D883 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
U2af1Q9D883 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
U2af1Q9D883 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
U2af1Q9D883 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
U2af1Q9D883 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
U2af1Q9D883 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
U2af1Q9D883 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
U2af1Q9D883 AC159195.1-201ENSMUST00000225867 2086 ntBASIC16.3■□□□□ 0.2
U2af1Q9D883 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
U2af1Q9D883 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
U2af1Q9D883 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Crry-ps-201ENSMUST00000079090 1309 ntBASIC16.29■□□□□ 0.2
U2af1Q9D883 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
U2af1Q9D883 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC16.29■□□□□ 0.2
U2af1Q9D883 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC16.29■□□□□ 0.2
U2af1Q9D883 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC16.29■□□□□ 0.2
U2af1Q9D883 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC16.29■□□□□ 0.2
U2af1Q9D883 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC16.29■□□□□ 0.2
U2af1Q9D883 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC16.29■□□□□ 0.2
U2af1Q9D883 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC16.29■□□□□ 0.2
U2af1Q9D883 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
U2af1Q9D883 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
U2af1Q9D883 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
U2af1Q9D883 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
U2af1Q9D883 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC16.28■□□□□ 0.2
U2af1Q9D883 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
U2af1Q9D883 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC16.28■□□□□ 0.2
U2af1Q9D883 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
U2af1Q9D883 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
U2af1Q9D883 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms