Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd1Q9D0E3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Lysmd1Q9D0E3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Lysmd1Q9D0E3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Lysmd1Q9D0E3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Lysmd1Q9D0E3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Gm15004-201ENSMUST00000119192 630 ntBASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Gm9673-201ENSMUST00000119287 781 ntBASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Gm24294-201ENSMUST00000158295 277 ntBASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Gm44216-201ENSMUST00000203942 157 ntBASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Gm26670-202ENSMUST00000226862 340 ntBASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.14□□□□□ -0.31
Lysmd1Q9D0E3 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Gm23745-201ENSMUST00000104230 125 ntBASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Gm12418-201ENSMUST00000118116 942 ntBASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Gm13039-201ENSMUST00000118638 794 ntBASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Gm12791-201ENSMUST00000120788 655 ntBASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Gm15196-201ENSMUST00000121406 482 ntBASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Gm15982-201ENSMUST00000121681 554 ntBASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Gm38103-201ENSMUST00000191707 864 ntBASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Gm37826-201ENSMUST00000195329 322 ntBASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Gm30055-201ENSMUST00000203175 803 ntBASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Gm21759-201ENSMUST00000178345 1828 ntBASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd1Q9D0E3 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd1Q9D0E3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.12□□□□□ -0.31
Lysmd1Q9D0E3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Lysmd1Q9D0E3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms