Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shmt2Q9CZN7 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shmt2Q9CZN7 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shmt2Q9CZN7 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.88□□□□□ -0.51
Shmt2Q9CZN7 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shmt2Q9CZN7 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shmt2Q9CZN7 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shmt2Q9CZN7 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Shmt2Q9CZN7 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shmt2Q9CZN7 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Shmt2Q9CZN7 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shmt2Q9CZN7 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Gm14704-201ENSMUST00000120300 874 ntBASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Gm12291-201ENSMUST00000121627 311 ntBASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Gm16379-201ENSMUST00000161469 348 ntBASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Gm22121-201ENSMUST00000175148 54 ntBASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Gm27514-201ENSMUST00000183692 110 ntBASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Gm27390-201ENSMUST00000184516 176 ntBASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Gm8762-201ENSMUST00000193486 339 ntBASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.87□□□□□ -0.51
Shmt2Q9CZN7 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Gm12957-201ENSMUST00000117835 377 ntBASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Gm14921-201ENSMUST00000118643 908 ntBASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Gm12363-201ENSMUST00000122250 668 ntBASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Gm25927-201ENSMUST00000175058 117 ntBASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Gm37424-201ENSMUST00000191727 561 ntBASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Gm19184-201ENSMUST00000196798 928 ntBASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Shmt2Q9CZN7 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms