Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Gm7488-201ENSMUST00000117148 684 ntBASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Gm7063-201ENSMUST00000186840 981 ntBASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Gm42612-201ENSMUST00000197986 623 ntBASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Gm43170-201ENSMUST00000199827 612 ntBASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Mir339-201ENSMUST00000083659 96 ntBASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim13Q9CYB0 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Gm28693-202ENSMUST00000190758 331 ntBASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Gm6218-201ENSMUST00000219812 628 ntBASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trim13Q9CYB0 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim13Q9CYB0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms