Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Gm12036-201ENSMUST00000120008 530 ntBASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Mir7023-201ENSMUST00000185093 64 ntBASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Gm44872-201ENSMUST00000207864 420 ntBASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ssu72Q9CY97 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ssu72Q9CY97 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.3□□□□□ -0.44
Ssu72Q9CY97 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms