Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb1Q9CQ70 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Gm8018-201ENSMUST00000173536 789 ntBASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Gm9022-201ENSMUST00000182482 992 ntBASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Gm44882-201ENSMUST00000205702 802 ntBASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb1Q9CQ70 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Pck2-205ENSMUST00000226352 2784 ntBASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
H2afb1Q9CQ70 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 205.3 ms