Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Gm45784-201ENSMUST00000188360 142 ntBASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Gm8227-201ENSMUST00000223306 571 ntBASIC14.15□□□□□ -0.14
Trim11Q99PQ2 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Snora73a-201ENSMUST00000082453 205 ntBASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.15□□□□□ -0.14
Trim11Q99PQ2 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trim11Q99PQ2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim11Q99PQ2 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Gm13226-201ENSMUST00000117838 404 ntBASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Gm12314-201ENSMUST00000118104 538 ntBASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Gm14660-201ENSMUST00000119809 575 ntBASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Gm25261-201ENSMUST00000157416 134 ntBASIC14.13□□□□□ -0.15
Trim11Q99PQ2 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Gm7063-201ENSMUST00000186840 981 ntBASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Gm18304-201ENSMUST00000189162 546 ntBASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Gm44882-201ENSMUST00000205702 802 ntBASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim11Q99PQ2 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim11Q99PQ2 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms