Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SncaipQ99ME3 Gm10434-201ENSMUST00000101158 471 ntBASIC12.84□□□□□ -0.35
SncaipQ99ME3 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SncaipQ99ME3 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
SncaipQ99ME3 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SncaipQ99ME3 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SncaipQ99ME3 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.84□□□□□ -0.35
SncaipQ99ME3 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SncaipQ99ME3 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SncaipQ99ME3 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.84□□□□□ -0.35
SncaipQ99ME3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SncaipQ99ME3 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SncaipQ99ME3 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SncaipQ99ME3 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SncaipQ99ME3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SncaipQ99ME3 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SncaipQ99ME3 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SncaipQ99ME3 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SncaipQ99ME3 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SncaipQ99ME3 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SncaipQ99ME3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SncaipQ99ME3 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SncaipQ99ME3 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.83□□□□□ -0.35
SncaipQ99ME3 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
SncaipQ99ME3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SncaipQ99ME3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SncaipQ99ME3 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SncaipQ99ME3 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Gm13786-201ENSMUST00000122371 333 ntBASIC12.83□□□□□ -0.36
SncaipQ99ME3 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Mospd4-201ENSMUST00000180618 576 ntBASIC12.83□□□□□ -0.36
SncaipQ99ME3 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Gm10608-202ENSMUST00000213924 676 ntBASIC12.83□□□□□ -0.36
SncaipQ99ME3 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.83□□□□□ -0.36
SncaipQ99ME3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SncaipQ99ME3 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SncaipQ99ME3 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SncaipQ99ME3 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SncaipQ99ME3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SncaipQ99ME3 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SncaipQ99ME3 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SncaipQ99ME3 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SncaipQ99ME3 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SncaipQ99ME3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.82□□□□□ -0.36
SncaipQ99ME3 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SncaipQ99ME3 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SncaipQ99ME3 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.82□□□□□ -0.36
SncaipQ99ME3 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SncaipQ99ME3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
SncaipQ99ME3 Gm13342-201ENSMUST00000121055 207 ntBASIC12.82□□□□□ -0.36
SncaipQ99ME3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SncaipQ99ME3 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.82□□□□□ -0.36
SncaipQ99ME3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SncaipQ99ME3 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.82□□□□□ -0.36
SncaipQ99ME3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SncaipQ99ME3 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.82□□□□□ -0.36
SncaipQ99ME3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.82□□□□□ -0.36
SncaipQ99ME3 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.82□□□□□ -0.36
SncaipQ99ME3 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.82□□□□□ -0.36
SncaipQ99ME3 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.82□□□□□ -0.36
SncaipQ99ME3 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.82□□□□□ -0.36
SncaipQ99ME3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.82□□□□□ -0.36
SncaipQ99ME3 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.82□□□□□ -0.36
SncaipQ99ME3 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.82□□□□□ -0.36
SncaipQ99ME3 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SncaipQ99ME3 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SncaipQ99ME3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SncaipQ99ME3 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.82□□□□□ -0.36
SncaipQ99ME3 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms