Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC13.09□□□□□ -0.31
Clp1Q99LI9 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clp1Q99LI9 Gm10652-201ENSMUST00000199790 2622 ntBASIC13.09□□□□□ -0.31
Clp1Q99LI9 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clp1Q99LI9 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.09□□□□□ -0.31
Clp1Q99LI9 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC13.09□□□□□ -0.31
Clp1Q99LI9 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clp1Q99LI9 AC125117.2-201ENSMUST00000228344 1140 ntBASIC13.09□□□□□ -0.31
Clp1Q99LI9 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clp1Q99LI9 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Clp1Q99LI9 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Clp1Q99LI9 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Clp1Q99LI9 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clp1Q99LI9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clp1Q99LI9 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.09□□□□□ -0.31
Clp1Q99LI9 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.09□□□□□ -0.31
Clp1Q99LI9 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.09□□□□□ -0.31
Clp1Q99LI9 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Clp1Q99LI9 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clp1Q99LI9 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Clp1Q99LI9 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.09□□□□□ -0.31
Clp1Q99LI9 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.09□□□□□ -0.31
Clp1Q99LI9 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.09□□□□□ -0.31
Clp1Q99LI9 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clp1Q99LI9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clp1Q99LI9 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.31
Clp1Q99LI9 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Clp1Q99LI9 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clp1Q99LI9 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clp1Q99LI9 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.08□□□□□ -0.32
Clp1Q99LI9 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Clp1Q99LI9 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clp1Q99LI9 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clp1Q99LI9 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.08□□□□□ -0.32
Clp1Q99LI9 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clp1Q99LI9 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clp1Q99LI9 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clp1Q99LI9 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clp1Q99LI9 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clp1Q99LI9 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Clp1Q99LI9 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC13.08□□□□□ -0.32
Clp1Q99LI9 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clp1Q99LI9 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Clp1Q99LI9 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.08□□□□□ -0.32
Clp1Q99LI9 Mir6958-201ENSMUST00000184207 73 ntBASIC13.08□□□□□ -0.32
Clp1Q99LI9 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clp1Q99LI9 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.08□□□□□ -0.32
Clp1Q99LI9 Gm7395-201ENSMUST00000216059 1045 ntBASIC13.08□□□□□ -0.32
Clp1Q99LI9 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.08□□□□□ -0.32
Clp1Q99LI9 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.08□□□□□ -0.32
Clp1Q99LI9 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clp1Q99LI9 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clp1Q99LI9 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Clp1Q99LI9 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.08□□□□□ -0.32
Clp1Q99LI9 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clp1Q99LI9 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.08□□□□□ -0.32
Clp1Q99LI9 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clp1Q99LI9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Clp1Q99LI9 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clp1Q99LI9 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.08□□□□□ -0.32
Clp1Q99LI9 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.07□□□□□ -0.32
Clp1Q99LI9 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Gm14760-201ENSMUST00000121831 999 ntBASIC13.07□□□□□ -0.32
Clp1Q99LI9 Gm16397-201ENSMUST00000122201 494 ntBASIC13.07□□□□□ -0.32
Clp1Q99LI9 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Gm7666-201ENSMUST00000146631 819 ntBASIC13.07□□□□□ -0.32
Clp1Q99LI9 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clp1Q99LI9 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Gm38210-201ENSMUST00000191944 809 ntBASIC13.07□□□□□ -0.32
Clp1Q99LI9 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clp1Q99LI9 AC132901.1-201ENSMUST00000224345 508 ntBASIC13.07□□□□□ -0.32
Clp1Q99LI9 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.07□□□□□ -0.32
Clp1Q99LI9 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Gm9785-201ENSMUST00000062642 1006 ntBASIC13.07□□□□□ -0.32
Clp1Q99LI9 Snora73b-201ENSMUST00000083419 205 ntBASIC13.07□□□□□ -0.32
Clp1Q99LI9 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clp1Q99LI9 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms